Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 ZNF519P1-201ENST00000449011 1626 ntBASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
BRPF3Q9ULD4 SDAD1P1-202ENST00000524156 2051 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 MTND5P10-201ENST00000603719 1809 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 Y_RNA.135-201ENST00000363439 95 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RNU6-601P-201ENST00000384540 107 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RNU6-308P-201ENST00000390957 107 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 MIR921-201ENST00000401133 56 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RNU6-954P-201ENST00000411355 107 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 MTND3P2-201ENST00000438452 342 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL121871.1-201ENST00000443413 436 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RPS11P1-201ENST00000451072 473 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RNU7-167P-201ENST00000459160 62 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RPL36AP41-201ENST00000493820 306 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC025445.1-201ENST00000502728 300 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 Y_RNA.689-201ENST00000516589 107 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 RNA5SP309-201ENST00000516670 106 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC022634.1-201ENST00000520765 532 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC067852.3-201ENST00000589177 561 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AC104763.2-201ENST00000604179 382 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 Mico1.1-201ENST00000611698 204 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 uc_338.32-201ENST00000615087 172 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 FAM157A-202ENST00000615155 405 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL359547.2-201ENST00000615810 418 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL355365.1-201ENST00000616480 294 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 AL133383.2-201ENST00000622958 2336 ntBASIC5.47□□□□□ -1.53
BRPF3Q9ULD4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRPF3Q9ULD4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRPF3Q9ULD4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
BRPF3Q9ULD4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
BRPF3Q9ULD4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRPF3Q9ULD4 RNU6-715P-201ENST00000365204 103 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 Y_RNA.459-201ENST00000384251 102 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 RNU6-434P-201ENST00000384376 107 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 CISD1P1-201ENST00000393907 327 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC092809.3-201ENST00000415453 231 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 RPL31P12-201ENST00000422587 358 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 SNAP23P1-201ENST00000433229 246 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AL049745.1-201ENST00000433953 286 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 MTCO3P10-201ENST00000455912 772 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 RPL12P20-201ENST00000475538 479 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC078918.1-201ENST00000498515 228 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC079140.5-201ENST00000507882 310 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 SMURF2P1-201ENST00000514992 481 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 RNA5SP446-201ENST00000515955 82 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 SNORA14.1-201ENST00000516113 141 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 RNU6-352P-201ENST00000516908 107 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 OR4H12P-201ENST00000556269 907 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 MIR3671-201ENST00000580455 88 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 MIR5692C1-201ENST00000585309 91 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AL049539.1-201ENST00000611964 459 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 AC018555.1-201ENST00000567548 1980 ntBASIC5.46□□□□□ -1.54
BRPF3Q9ULD4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRPF3Q9ULD4 MTND5P19-201ENST00000424872 1794 ntBASIC5.45□□□□□ -1.54
BRPF3Q9ULD4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms