Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 RNU6-859P-201ENST00000362728 107 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 RNU6-560P-201ENST00000364007 108 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 SNORD116-12-201ENST00000384468 92 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AL513331.1-201ENST00000411908 397 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 USP9YP20-201ENST00000419224 558 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 RPL26P9-201ENST00000457466 433 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 MTND1P16-201ENST00000465177 898 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 RPS29P20-201ENST00000489592 171 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC008716.1-201ENST00000511084 513 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 TBCAP3-201ENST00000512475 312 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 HMGB1P41-201ENST00000520234 440 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC021451.1-201ENST00000523498 1129 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AL356575.1-201ENST00000603008 283 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC007619.2-201ENST00000605743 379 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 PART1_2.1-201ENST00000612397 250 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 SNHG22-203ENST00000617833 660 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 AC079228.1-201ENST00000624774 1049 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC40Q9H9A6 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 PABPC1P9-201ENST00000426076 1612 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 RN7SKP226-201ENST00000364912 300 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 Y_RNA.472-201ENST00000384322 102 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 TAS2R15P-201ENST00000390674 928 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 RNU6-1000P-201ENST00000391066 106 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AL590084.2-201ENST00000401481 382 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 MIR1284-201ENST00000408337 120 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AL953862.1-201ENST00000423016 168 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 RPS15AP5-201ENST00000436276 388 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 COX7BP2-201ENST00000437976 242 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 MEMO1P3-201ENST00000459811 302 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 HMGB1P36-201ENST00000487709 576 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC097462.2-201ENST00000504623 481 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC024589.1-201ENST00000512207 263 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC034159.1-201ENST00000513885 583 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC096725.1-201ENST00000514266 313 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 OR4K7P-201ENST00000580232 945 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 MIR3200-201ENST00000580767 85 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC060766.3-201ENST00000591442 263 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 BNIP3P27-201ENST00000599991 412 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 ATP1B3P1-201ENST00000605365 821 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC005000.2-201ENST00000605468 310 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC106858.1-201ENST00000637497 429 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC099063.3-201ENST00000642066 185 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 AC011477.1-204ENST00000623416 1325 ntBASIC2.62□□□□□ -1.99
LRRC40Q9H9A6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 SNORD62.1-201ENST00000362541 86 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU6-289P-201ENST00000364093 107 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU6-744P-201ENST00000365557 107 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU6-432P-201ENST00000384196 109 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU6-1316P-201ENST00000384242 108 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 MIR888-201ENST00000401186 77 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU2-49P-201ENST00000410666 184 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 ZYG11AP1-201ENST00000430329 837 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RPL35AP22-201ENST00000436855 335 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 SNRPEP7-201ENST00000438350 220 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC104389.3-201ENST00000445629 235 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC107626.1-201ENST00000471084 183 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC135721.1-201ENST00000497954 479 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
LRRC40Q9H9A6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms