Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 SNORD74.4-201ENST00000364129 80 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 RN7SKP226-201ENST00000364912 300 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 SNORA36C-201ENST00000384289 132 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 HSPE1P26-201ENST00000405341 275 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 MTHFD2P2-201ENST00000407725 247 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 MIR1183-201ENST00000408856 89 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 RAC1P6-201ENST00000423911 575 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 RPS3AP44-201ENST00000425466 790 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC104651.1-201ENST00000427559 735 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 MED13P1-201ENST00000428342 171 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 NDUFB1P1-201ENST00000435191 180 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 PSPHP1-201ENST00000450062 261 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 RPS20P20-201ENST00000460498 340 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC004924.1-201ENST00000480160 781 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 PHBP14-201ENST00000512887 367 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 DEFB131E-202ENST00000602581 683 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 AC110741.2-201ENST00000605278 268 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 U4.5-201ENST00000617137 123 ntBASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RTFDC1Q9BY42 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 DEFB109C-201ENST00000382575 264 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 DEFB109B-201ENST00000382656 264 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 U3.19-201ENST00000390893 196 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC018630.2-202ENST00000422992 927 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC007283.2-201ENST00000424739 197 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 ISCA1P1-201ENST00000426679 387 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 C8orf59P1-201ENST00000429930 303 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC132479.1-201ENST00000449160 144 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AP001486.1-201ENST00000463339 476 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC010631.1-201ENST00000474150 156 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 RNU6-506P-201ENST00000516553 94 ntBASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RTFDC1Q9BY42 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RNU6-181P-201ENST00000363225 107 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RNU6-169P-201ENST00000365336 107 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 SNORA48.5-201ENST00000391143 135 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AF274854.1-201ENST00000413236 615 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 OR2AS1P-201ENST00000427827 319 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 ATP5HP2-201ENST00000433885 485 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 TXNP1-201ENST00000441872 371 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 SRRM1P2-201ENST00000464531 1192 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RPL9P33-201ENST00000484311 566 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RPL9P6-201ENST00000492764 598 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC010342.1-201ENST00000514047 877 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 SCARNA15.2-201ENST00000516409 127 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RNU6-445P-201ENST00000516949 107 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RNU6-1092P-201ENST00000516955 87 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 RPS3AP4-201ENST00000555161 764 ntBASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.34□□□□□ -1.71
RTFDC1Q9BY42 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms