Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
MEIS3Q99687 DDX18P3-201ENST00000404856 2007 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 AL022578.1-201ENST00000439330 1433 ntBASIC3.7□□□□□ -1.82
MEIS3Q99687 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
MEIS3Q99687 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
MEIS3Q99687 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MEIS3Q99687 Y_RNA.160-201ENST00000363677 92 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
MEIS3Q99687 RNU6-769P-201ENST00000384407 104 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 SNORA70E-201ENST00000384492 135 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 RNU6-952P-201ENST00000391164 108 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL583834.1-201ENST00000406943 343 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 RNU2-41P-201ENST00000410991 178 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 SPA17P1-201ENST00000416656 452 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AL589872.1-201ENST00000426602 288 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 RPS24P8-201ENST00000431490 402 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 FCF1P1-201ENST00000432690 571 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC093156.1-201ENST00000440382 670 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC106872.2-201ENST00000494303 480 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC034159.1-201ENST00000513885 583 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.69□□□□□ -1.82
MEIS3Q99687 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AP001893.2-201ENST00000526949 202 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.69□□□□□ -1.82
MEIS3Q99687 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.69□□□□□ -1.82
MEIS3Q99687 HMGB1P33-201ENST00000563485 527 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AL117336.2-201ENST00000602435 335 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL590282.1-201ENST00000610379 1136 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AL020991.1-201ENST00000612314 373 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC108479.2-201ENST00000617314 601 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC012150.2-201ENST00000621300 544 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL445264.1-201ENST00000621719 171 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AC010338.1-201ENST00000621823 717 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.69□□□□□ -1.82
MEIS3Q99687 AP003400.5-201ENST00000624827 617 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 AL118496.1-201ENST00000440201 1812 ntBASIC3.69□□□□□ -1.82
MEIS3Q99687 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.69□□□□□ -1.82
MEIS3Q99687 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.68□□□□□ -1.82
MEIS3Q99687 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.68□□□□□ -1.82
MEIS3Q99687 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MEIS3Q99687 AC011155.1-201ENST00000316512 456 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 RNU6-282P-201ENST00000365357 103 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.68□□□□□ -1.82
MEIS3Q99687 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.68□□□□□ -1.82
MEIS3Q99687 NPM1P24-201ENST00000428039 894 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 RPL36P19-201ENST00000430744 301 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC109583.1-201ENST00000432156 268 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AL162389.1-201ENST00000449233 177 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 SNRPFP4-201ENST00000456366 242 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 RPL7P23-201ENST00000493874 747 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 RNU6-358P-201ENST00000516564 75 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC022080.3-201ENST00000544433 482 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC123904.3-201ENST00000547218 814 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.68□□□□□ -1.82
MEIS3Q99687 VN1R84P-201ENST00000593697 235 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.68□□□□□ -1.82
MEIS3Q99687 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.68□□□□□ -1.82
MEIS3Q99687 AL035413.2-201ENST00000604801 525 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 AC011816.2-201ENST00000607089 556 ntBASIC3.68□□□□□ -1.82
MEIS3Q99687 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MEIS3Q99687 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.68□□□□□ -1.82
MEIS3Q99687 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MEIS3Q99687 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MEIS3Q99687 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MEIS3Q99687 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
MEIS3Q99687 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
MEIS3Q99687 AC114546.3-201ENST00000623582 1734 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MEIS3Q99687 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.67□□□□□ -1.82
MEIS3Q99687 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MEIS3Q99687 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
MEIS3Q99687 Y_RNA.1-201ENST00000352915 104 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 RNU6-181P-201ENST00000363225 107 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 MIR506-201ENST00000384998 124 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 AL603766.1-201ENST00000407763 664 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 MTCO1P17-201ENST00000411522 491 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 USP9YP27-201ENST00000418455 438 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 AC233981.1-201ENST00000423224 461 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
MEIS3Q99687 AC009965.2-201ENST00000425328 970 ntBASIC3.67□□□□□ -1.82
MEIS3Q99687 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms