Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.15□□□□□ -1.91
CDCA3Q99618 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA3Q99618 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA3Q99618 RNU6-173P-201ENST00000364215 104 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AL139095.1-201ENST00000404326 391 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA3Q99618 NPM1P11-201ENST00000417106 855 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 TRIAP1P1-201ENST00000427062 225 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC024082.2-201ENST00000434771 238 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 TRIM60P18-201ENST00000441518 828 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.15□□□□□ -1.91
CDCA3Q99618 AP1S2P1-201ENST00000457344 379 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.15□□□□□ -1.91
CDCA3Q99618 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDCA3Q99618 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDCA3Q99618 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.15□□□□□ -1.91
CDCA3Q99618 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.15□□□□□ -1.91
CDCA3Q99618 MTCO2P32-201ENST00000514865 403 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 RN7SKP60-201ENST00000516985 239 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AL133271.1-201ENST00000538229 291 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.15□□□□□ -1.91
CDCA3Q99618 MIR4425-201ENST00000580572 84 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.15□□□□□ -1.91
CDCA3Q99618 AC008507.1-201ENST00000587506 734 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 MIR6715A-201ENST00000615929 79 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC095031.1-201ENST00000623685 672 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC112204.3-201ENST00000623822 332 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 AC073476.4-201ENST00000628409 72 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CDCA3Q99618 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA3Q99618 TAB3P1-202ENST00000452645 1634 ntBASIC3.15□□□□□ -1.91
CDCA3Q99618 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDCA3Q99618 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CDCA3Q99618 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA3Q99618 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.14□□□□□ -1.91
CDCA3Q99618 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AL136372.1-201ENST00000403060 228 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AP000567.1-201ENST00000406413 156 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 RPS3AP24-201ENST00000407896 734 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 MTND2P4-201ENST00000445034 1004 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 MTND1P9-201ENST00000453775 944 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA3Q99618 RPL7P5-201ENST00000471472 736 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 HMGB3P15-201ENST00000507326 574 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 RNU6-798P-201ENST00000516912 103 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC060788.1-201ENST00000521318 469 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.14□□□□□ -1.91
CDCA3Q99618 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.14□□□□□ -1.91
CDCA3Q99618 AL035413.2-201ENST00000604801 525 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC012443.1-201ENST00000605605 231 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 AC012360.2-201ENST00000609349 391 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
CDCA3Q99618 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA3Q99618 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
CDCA3Q99618 ELL2P3-201ENST00000457883 1602 ntBASIC3.14□□□□□ -1.91
CDCA3Q99618 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA3Q99618 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDCA3Q99618 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDCA3Q99618 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA3Q99618 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
CDCA3Q99618 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA3Q99618 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA3Q99618 RNU6-50P-201ENST00000362356 103 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDCA3Q99618 RNU6-637P-201ENST00000384050 107 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDCA3Q99618 RPS20P2-201ENST00000402520 389 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 RNU6-516P-201ENST00000411381 104 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC078974.1-201ENST00000411597 223 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 CYCSP46-201ENST00000423569 204 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 RABEPKP1-201ENST00000440529 1026 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC118469.1-201ENST00000442943 488 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC006539.3-201ENST00000454258 129 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
CDCA3Q99618 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.13□□□□□ -1.91
CDCA3Q99618 AC116337.2-201ENST00000477662 156 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AP000797.1-201ENST00000478870 387 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 CBX3P3-201ENST00000508108 532 ntBASIC3.13□□□□□ -1.91
CDCA3Q99618 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.13□□□□□ -1.91
CDCA3Q99618 AC022483.1-201ENST00000514020 567 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms