Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MIR892C-201ENST00000516410 77 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 CBX3P7-201ENST00000532876 502 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 DEFB122-202ENST00000569013 197 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL021997.1-201ENST00000605757 193 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL589743.7-201ENST00000612637 233 ntBASIC1.41□□□□□ -2.18
AP1S3Q96PC3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.41□□□□□ -2.18
AP1S3Q96PC3 MTND5P6-201ENST00000422338 1798 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 RNU4-42P-201ENST00000364738 142 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 MIR135A2-201ENST00000384854 100 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 RNU2-17P-201ENST00000410290 190 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AL135786.1-201ENST00000415892 214 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 RPL31P54-201ENST00000429803 370 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC080013.2-201ENST00000460866 323 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 MRPS17P3-201ENST00000465453 385 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC093767.1-201ENST00000504523 156 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC098591.2-201ENST00000510152 315 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC091965.2-201ENST00000512324 613 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 SNORA31.6-201ENST00000516241 130 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 IGKV3-31-201ENST00000523109 329 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 SNORD39.3-201ENST00000584451 71 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 BNIP3P33-201ENST00000598912 569 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 MIR6798-201ENST00000612887 67 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC107905.1-201ENST00000616204 426 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 MIR7157-201ENST00000635801 60 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC103710.2-202ENST00000641454 2853 ntBASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
AP1S3Q96PC3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 SNORA23-201ENST00000365128 182 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 MIR147B-201ENST00000390185 80 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 RNU6-750P-201ENST00000390946 107 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC016769.3-201ENST00000396562 315 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AL049734.2-201ENST00000441066 616 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC087884.1-201ENST00000469738 328 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC025181.1-201ENST00000477507 416 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 LARP1BP2-201ENST00000486594 519 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC138853.1-201ENST00000503549 823 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC113420.1-201ENST00000507903 571 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC104108.1-201ENST00000509930 412 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 SCARNA3-201ENST00000517097 143 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AP001317.1-201ENST00000531194 960 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC010928.2-201ENST00000588017 287 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AL020997.3-201ENST00000602843 359 ntBASIC1.39□□□□□ -2.19
AP1S3Q96PC3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
AP1S3Q96PC3 AC025263.3-201ENST00000622965 1396 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 SNORA16.1-201ENST00000364597 132 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 RNA5SP363-201ENST00000365072 115 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AL024474.1-201ENST00000404655 591 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 PTGES3P2-201ENST00000407942 482 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 RN7SKP158-201ENST00000410453 326 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 HMGB1P49-201ENST00000418882 569 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC092047.1-201ENST00000424997 240 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 BNIP3P2-201ENST00000441221 577 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC108043.1-201ENST00000512696 574 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AP003122.3-201ENST00000526316 255 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC022880.1-201ENST00000534017 973 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 AC084033.1-201ENST00000550830 633 ntBASIC1.38□□□□□ -2.19
AP1S3Q96PC3 MIR5089-201ENST00000580047 84 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms