Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 MIR15A-201ENST00000607334 83 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 U4.1-201ENST00000620349 87 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 SALL4P2-201ENST00000423288 2910 ntBASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTCHD1Q96NR3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 PRO1804-201ENST00000623780 2050 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RNU6-76P-201ENST00000384060 104 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RNU6-356P-201ENST00000384140 107 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RN7SKP267-201ENST00000410381 285 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 BX842559.1-201ENST00000419615 532 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 CKS1BP6-201ENST00000424932 240 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 USP9YP30-201ENST00000430729 455 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 HMGB1P27-201ENST00000431429 603 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC079168.2-201ENST00000453977 416 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RPL21P41-201ENST00000459863 264 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC128713.1-201ENST00000471495 306 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 CEACAMP10-202ENST00000495431 496 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC009901.1-201ENST00000506703 541 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC092436.3-201ENST00000511788 257 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 SCARNA16.2-201ENST00000516520 172 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 ERHP1-201ENST00000523006 310 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 HMGB3P26-201ENST00000560051 582 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RN7SL435P-201ENST00000584418 282 ntBASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTCHD1Q96NR3 AC066616.2-201ENST00000559334 1481 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 CDC27P3-201ENST00000635418 1910 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC138393.1-203ENST00000327086 343 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.2-201ENST00000362330 96 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.176-201ENST00000363815 109 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RNU6-371P-201ENST00000364283 108 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.428-201ENST00000384078 102 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 Y_RNA.480-201ENST00000384364 102 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 SNORD3H-201ENST00000384486 214 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 U3.35-201ENST00000408405 208 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RN7SKP106-201ENST00000410832 272 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RPL36AP10-201ENST00000421785 322 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 H2AFZP5-201ENST00000446960 382 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 PRDX3P3-201ENST00000447765 522 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 DHFRP3-201ENST00000455595 559 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC010326.1-201ENST00000462726 602 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RPL31P60-201ENST00000478450 367 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AP000926.1-201ENST00000479573 241 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC022493.2-201ENST00000506122 481 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 GMPSP1-201ENST00000514075 579 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RNA5SP384-201ENST00000516615 116 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AL110118.1-201ENST00000553543 400 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 RPL23AP87-202ENST00000573039 466 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AL355598.1-201ENST00000604169 202 ntBASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.43□□□□□ -1.7
PTCHD1Q96NR3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms