Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE4Q8N205 RNU6-744P-201ENST00000365557 107 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RNU6-1316P-201ENST00000384242 108 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 MIR93-201ENST00000385024 80 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 SSXP10-201ENST00000402595 565 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 BTBD10P2-201ENST00000404779 676 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 MTHFD2P2-201ENST00000407725 247 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RNU2-9P-201ENST00000410194 145 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RN7SKP53-201ENST00000411337 315 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RPL30P3-201ENST00000424262 333 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 MTCO2P12-201ENST00000427426 682 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 NDUFA5P4-201ENST00000436704 385 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 CACYBPP2-201ENST00000453625 678 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 RN7SL429P-201ENST00000479090 223 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RN7SL489P-201ENST00000486185 223 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RN7SL327P-201ENST00000488659 223 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC090453.1-201ENST00000495560 436 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC103851.1-201ENST00000506833 274 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 RNU6-201P-201ENST00000517100 61 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC107934.1-201ENST00000522215 217 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC107953.1-201ENST00000522216 297 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC022690.1-201ENST00000526681 550 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC023050.3-201ENST00000541142 333 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC067852.3-201ENST00000589177 561 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 VN1R80P-201ENST00000597126 338 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC013553.2-201ENST00000604244 589 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 RN7SL853P-201ENST00000617250 223 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 LINC00901.1-201ENST00000617252 152 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AC233309.1-201ENST00000619522 751 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 AL049780.3-201ENST00000624612 1583 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 MIR1302-1-201ENST00000637932 143 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE4Q8N205 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.42□□□□□ -1.7
SYNE4Q8N205 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE4Q8N205 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNE4Q8N205 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 RPL7P26-201ENST00000333817 754 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 Y_RNA.166-201ENST00000363730 102 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 Y_RNA.184-201ENST00000363884 108 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 SNORD74.4-201ENST00000364129 80 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 RNU6-730P-201ENST00000383954 104 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 Y_RNA.481-201ENST00000384373 102 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 MRPL50P2-201ENST00000416821 482 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AL353777.1-201ENST00000425552 326 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC016691.1-201ENST00000441321 413 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 HMGB3P22-202ENST00000451823 572 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 NIPA2P5-201ENST00000452282 464 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC087385.1-201ENST00000475062 312 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC233702.1-201ENST00000482905 502 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC093663.1-201ENST00000497190 394 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 SNORA40.12-201ENST00000516329 111 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 SCOCP1-201ENST00000554676 349 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 EIF4BP1-201ENST00000554881 351 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 BBIP1P1-201ENST00000602999 279 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 BX664608.1-201ENST00000610519 487 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC009318.4-201ENST00000620496 486 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC090617.10-201ENST00000624308 134 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC010149.2-201ENST00000637608 315 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AL356489.2-201ENST00000566968 3528 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 AC097504.1-201ENST00000515103 2415 ntBASIC4.41□□□□□ -1.7
SYNE4Q8N205 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE4Q8N205 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms