Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL157871.3-201ENST00000557231 293 ntBASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 AC024614.2-201ENST00000577584 372 ntBASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 AC067852.4-201ENST00000590314 478 ntBASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 AC073869.8-201ENST00000641806 335 ntBASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SCUBE3Q8IX30 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AC087516.1-201ENST00000561236 2428 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 UBE2L2-201ENST00000254302 429 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 Y_RNA.123-201ENST00000363338 102 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RNU6-1155P-201ENST00000363554 107 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RNA5SP234-201ENST00000363916 119 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RNU6-384P-201ENST00000364900 104 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 MIR186-201ENST00000384988 86 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RNU11-201ENST00000387069 134 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AL645927.1-201ENST00000396783 406 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 SSXP9-201ENST00000417503 292 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 OOSP1P1-201ENST00000423265 274 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AC138761.5-201ENST00000433967 325 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 HSPD1P21-201ENST00000436541 245 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AC091179.1-201ENST00000461606 579 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RN7SL51P-201ENST00000468230 285 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 GMPSP1-201ENST00000514075 579 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RNU6-426P-201ENST00000516464 97 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AL360012.1-201ENST00000602813 131 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AC099506.2-201ENST00000623074 221 ntBASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.76□□□□□ -1.49
SCUBE3Q8IX30 AP005435.3-201ENST00000531260 3198 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC092681.1-201ENST00000297369 291 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 Y_RNA.33-201ENST00000362591 102 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 RNU6-1325P-201ENST00000364905 105 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 SNORA46.1-201ENST00000391069 153 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 RNA5SP56-201ENST00000410277 118 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AL358472.1-201ENST00000431295 329 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC099670.2-201ENST00000435130 321 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 NDUFB4P8-201ENST00000435351 367 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC073465.2-201ENST00000440938 498 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 YWHAEP4-201ENST00000505390 198 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 RN7SKP272-201ENST00000516988 232 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC023575.1-201ENST00000580510 358 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC008749.1-201ENST00000597650 306 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC000068.2-201ENST00000608816 460 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 IGHVIII-44-202ENST00000636235 289 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 RAD17P1-201ENST00000418130 2042 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 AC020633.1-201ENST00000468439 2247 ntBASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SCUBE3Q8IX30 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 AC025470.1-201ENST00000510053 2032 ntBASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SCUBE3Q8IX30 RNU6-312P-201ENST00000364629 107 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms