Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC022690.1-201ENST00000526681 550 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AP000889.1-201ENST00000530968 660 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC125611.2-201ENST00000551907 647 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 OR4T1P-201ENST00000554933 911 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 PCMTD1P2-201ENST00000565017 355 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC034105.3-201ENST00000565294 442 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 ROCK1P1-201ENST00000573767 549 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 MIR4307-201ENST00000582802 84 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 ELOCP29-201ENST00000588193 334 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 ATP1B3P1-201ENST00000605365 821 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 MIR7844-201ENST00000616161 122 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC079597.1-201ENST00000624306 508 ntBASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC60Q8IWA6 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL445523.1-201ENST00000451184 1362 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 Y_RNA.97-201ENST00000363094 102 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 MED14P1-201ENST00000430517 648 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL365184.2-201ENST00000431139 435 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC087499.2-201ENST00000432861 149 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 MTND1P30-201ENST00000441241 901 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 CBX3P3-201ENST00000508108 532 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AF131216.2-201ENST00000512316 564 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 RN7SKP43-201ENST00000516173 320 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 FAM60DP-201ENST00000524174 632 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 UBE2L4-201ENST00000587688 464 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 Z99497.2-201ENST00000603634 310 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC112187.2-201ENST00000604345 283 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC012443.1-201ENST00000605605 231 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL450472.3-201ENST00000615578 367 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 AL158801.5-201ENST00000623123 465 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 TAB3P1-202ENST00000452645 1634 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.17□□□□□ -1.9
CCDC60Q8IWA6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 CCT4P2-201ENST00000233836 1548 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RNU5F-6P-201ENST00000362979 116 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RNU6-809P-201ENST00000384461 107 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RPL21P3-201ENST00000395517 478 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 SNRPEP4-201ENST00000435815 279 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RPL37P21-201ENST00000435890 276 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AL512286.1-201ENST00000439244 400 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 EPS15P1-201ENST00000448836 336 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 MTCO1P42-201ENST00000457379 726 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 SETP11-201ENST00000473027 690 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 SNORA31.8-201ENST00000516327 108 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC106038.2-201ENST00000520706 568 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 MED28P6-201ENST00000558776 231 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC121247.2-201ENST00000604776 136 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC112204.3-201ENST00000623822 332 ntBASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC60Q8IWA6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC60Q8IWA6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC60Q8IWA6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC60Q8IWA6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CCDC60Q8IWA6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AC011460.1-201ENST00000636268 1834 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 AL021407.1-201ENST00000404531 386 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.15□□□□□ -1.91
CCDC60Q8IWA6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms