Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AC092447.6-201ENST00000414578 210 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 DDX39BP1-205ENST00000422507 192 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC104333.2-201ENST00000422630 192 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC004866.2-201ENST00000438285 481 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RPS23P7-201ENST00000466210 444 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 HMGB1P25-201ENST00000468402 607 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC087190.1-201ENST00000484462 480 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC107032.1-201ENST00000485945 480 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RN7SKP258-201ENST00000517151 304 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-840P-201ENST00000517275 65 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC022559.1-201ENST00000520905 205 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC087441.2-201ENST00000529141 262 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 OR4H12P-201ENST00000556269 907 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 MIR5701-3-201ENST00000578890 82 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 MIR5701-1-201ENST00000585138 82 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 MIR5701-2-201ENST00000615634 82 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 MTND5P9-201ENST00000503854 1755 ntBASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SH3RF1Q7Z6J0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 Y_RNA.458-201ENST00000384240 102 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AL035079.1-201ENST00000405210 287 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-735P-201ENST00000410612 107 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-607P-201ENST00000411283 108 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-603P-201ENST00000411403 107 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AL591043.1-201ENST00000432461 424 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 RPS29P10-201ENST00000439197 166 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AL360271.2-201ENST00000447710 161 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AL356981.1-201ENST00000454879 684 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 PARP1P2-201ENST00000556806 195 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 RPL23AP87-202ENST00000573039 466 ntBASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SH3RF1Q7Z6J0 AP001148.1-201ENST00000624124 2359 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-595P-201ENST00000363944 107 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 SNORA70.2-201ENST00000364506 135 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-1317P-201ENST00000364582 104 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 Y_RNA.324-201ENST00000365165 102 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC019155.1-201ENST00000382242 574 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6-1117P-201ENST00000384525 104 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 MIR578-201ENST00000384828 96 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC007738.1-201ENST00000413892 348 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RPL18P10-201ENST00000425606 538 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 AC091286.1-201ENST00000431233 461 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 PIGFP3-201ENST00000441918 722 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 PRDX3P3-201ENST00000447765 522 ntBASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SH3RF1Q7Z6J0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms