Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU6-1135P-201ENST00000411083 103 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 DPPA2P3-201ENST00000411853 655 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 BMS1P22-201ENST00000414726 313 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AL391219.1-201ENST00000422570 483 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RPL7AP49-201ENST00000429522 581 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AL591438.1-201ENST00000433508 581 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RPL26P6-201ENST00000440913 438 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RN7SKP210-201ENST00000459176 261 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 U8.21-201ENST00000459536 136 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 COX6B1P2-201ENST00000489624 230 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AP006245.1-201ENST00000522549 120 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC011921.3-201ENST00000605540 361 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 MIR7155-201ENST00000615925 56 ntBASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LYSMD3Q7Z3D4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC114947.2-201ENST00000565748 2125 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 SNORA12.2-201ENST00000391040 156 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-651P-201ENST00000411040 105 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 CTSL3P-202ENST00000412179 788 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AF186996.5-201ENST00000418098 904 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AL139148.1-201ENST00000427122 680 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 HMGB1P27-201ENST00000431429 603 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC087650.1-201ENST00000431445 468 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 RPL19P16-201ENST00000433839 588 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC090804.1-201ENST00000448870 490 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 HIGD1AP3-201ENST00000515857 278 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-1012P-201ENST00000516606 109 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC025755.1-201ENST00000521306 278 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AL355812.1-201ENST00000603215 216 ntBASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LYSMD3Q7Z3D4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.405-201ENST00000383979 100 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.451-201ENST00000384200 100 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-1035P-201ENST00000384477 107 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.504-201ENST00000384481 104 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.524-201ENST00000384564 100 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 Y_RNA.561-201ENST00000384694 100 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-417P-201ENST00000384712 107 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 MT-TC-201ENST00000387405 66 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 RNU6-821P-201ENST00000390995 107 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 CYB5AP4-201ENST00000396692 399 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC090774.1-201ENST00000435925 246 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC073587.1-201ENST00000447093 876 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC079354.2-201ENST00000453523 154 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 U8.22-201ENST00000459141 133 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 RPS23P1-201ENST00000491662 432 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC231760.1-201ENST00000498002 260 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 CASP1P1-201ENST00000526345 212 ntBASIC5.28□□□□□ -1.56
LYSMD3Q7Z3D4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms