Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 MTND4P13-201ENST00000402078 1023 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL138885.1-201ENST00000405921 675 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 RNA5SP344-201ENST00000411081 104 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC013410.2-201ENST00000422627 201 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL445669.1-201ENST00000426743 755 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 SETP8-201ENST00000435341 628 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 UBBP3-201ENST00000445497 241 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 OR6K1P-201ENST00000456766 971 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 RNU7-59P-201ENST00000459101 61 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 RPL27AP5-201ENST00000469428 449 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC117440.1-201ENST00000474107 571 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL160314.1-201ENST00000490836 438 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AP004247.1-201ENST00000531556 1289 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC013828.2-201ENST00000532487 235 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL391261.3-201ENST00000557194 520 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 MIR544B-201ENST00000582372 78 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL031281.1-201ENST00000604049 488 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC024560.3-201ENST00000608482 349 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC092106.3-201ENST00000611308 722 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL020991.1-201ENST00000612314 373 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AL139418.1-201ENST00000613613 177 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 Z99129.2-201ENST00000619967 314 ntBASIC2.66□□□□□ -1.98
NIPAL3Q6P499 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NIPAL3Q6P499 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.65□□□□□ -1.98
NIPAL3Q6P499 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
NIPAL3Q6P499 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 RNU6-433P-201ENST00000363216 104 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 MIR19A-201ENST00000384878 82 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AL590004.2-201ENST00000404787 371 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AL008987.1-201ENST00000415528 237 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 CYCSP32-201ENST00000440548 321 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC009296.1-201ENST00000443146 155 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC010631.1-201ENST00000474150 156 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 MTND5P13-201ENST00000513046 1079 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 H3F3AP1-201ENST00000559984 334 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC068790.3-201ENST00000602988 553 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AL355877.2-201ENST00000603670 358 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC136601.2-201ENST00000604356 474 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC144521.1-201ENST00000607148 956 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 FTX_3.1-201ENST00000610451 147 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AL607023.1-201ENST00000620045 248 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC010338.1-201ENST00000621823 717 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC097655.1-201ENST00000635075 318 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 AC000403.1-201ENST00000613696 3585 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 ASNSP3-201ENST00000451989 1306 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
NIPAL3Q6P499 ZNF833P-201ENST00000424938 1494 ntBASIC2.65□□□□□ -1.99
NIPAL3Q6P499 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NIPAL3Q6P499 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NIPAL3Q6P499 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NIPAL3Q6P499 RNU6-253P-201ENST00000384730 105 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 MIR491-201ENST00000384877 84 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 RPL5P18-201ENST00000406671 891 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 HMGB1P11-201ENST00000413899 637 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 BTF3L4P3-201ENST00000418879 476 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 AL022400.1-201ENST00000423946 935 ntBASIC2.64□□□□□ -1.99
NIPAL3Q6P499 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.64□□□□□ -1.99
NIPAL3Q6P499 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms