Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 RNA5SP235-201ENST00000365411 114 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 SNORA18.2-201ENST00000383865 132 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 MIR153-1-201ENST00000384914 90 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 RNU6-816P-201ENST00000390914 107 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 RNU6-1268P-201ENST00000391214 107 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 RNU6-1239P-201ENST00000391310 107 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 AL645939.1-201ENST00000453429 797 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 RNU2-44P-201ENST00000516795 194 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 YPEL5P2-201ENST00000605553 359 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 AC211486.4-201ENST00000621495 113 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC11.13□□□□□ -0.63
CHIC1Q5VXU3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 TNPO1P2-201ENST00000426249 2665 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 RN7SKP184-201ENST00000362348 333 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 SNORA67.2-201ENST00000384300 149 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 RNU1-46P-201ENST00000384425 164 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 MRPS21P5-201ENST00000417885 231 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 RNU6-1149P-201ENST00000516810 97 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 IGKV2-19-201ENST00000518132 283 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 RN7SL475P-201ENST00000583379 298 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 AL034555.1-201ENST00000604816 211 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 AC004925.1-201ENST00000624256 2706 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 HYDIN2-203ENST00000614586 13885 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 AC126323.6-202ENST00000568092 3511 ntBASIC11.12□□□□□ -0.63
CHIC1Q5VXU3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 RNA5SP515-201ENST00000364570 118 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 MIR1266-201ENST00000408125 84 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 AL929472.1-201ENST00000417484 429 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 LINC00328-2P-201ENST00000436585 219 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 AL133399.1-201ENST00000527476 298 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 RPL7AP69-201ENST00000595306 806 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 FAS-AS1.2-201ENST00000620386 170 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 AP001264.1-201ENST00000620602 703 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 AC010624.4-201ENST00000597606 1351 ntBASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
CHIC1Q5VXU3 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AC005618.1-201ENST00000606901 3148 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 SNURFL-201ENST00000309296 343 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 Y_RNA.66-201ENST00000362862 102 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AC005165.2-201ENST00000466070 380 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AC114324.2-202ENST00000503812 134 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 RNU6-1006P-201ENST00000516998 103 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AL513218.1-201ENST00000606527 391 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 AC058791.1-201ENST00000608412 3198 ntBASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
CHIC1Q5VXU3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 RNA5SP512-201ENST00000364550 120 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 RPL32P35-201ENST00000415214 394 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 MRPL35P3-201ENST00000421557 364 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 AL591419.1-201ENST00000427423 339 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 AL353705.1-201ENST00000433468 480 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 RPS26P55-201ENST00000471178 356 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 AC044810.1-201ENST00000480271 711 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 RNU7-149P-201ENST00000516739 59 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 IGLV3-6-201ENST00000523937 250 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 HNRNPA1P54-201ENST00000411857 9714 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 AC091564.4-201ENST00000533934 2194 ntBASIC11.09□□□□□ -0.63
CHIC1Q5VXU3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
CHIC1Q5VXU3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
CHIC1Q5VXU3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CHIC1Q5VXU3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms