Protein–RNA interactions for Protein: Q15843

NEDD8, NEDD8, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8Q15843 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.45□□□□□ -2.18
NEDD8Q15843 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.45□□□□□ -2.18
NEDD8Q15843 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NEDD8Q15843 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NEDD8Q15843 RNU6-1155P-201ENST00000363554 107 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 SNORA23-201ENST00000365128 182 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
NEDD8Q15843 TAF9BP2-201ENST00000400856 499 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC096920.1-201ENST00000423991 241 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AL009174.1-201ENST00000426577 416 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.44□□□□□ -2.18
NEDD8Q15843 RPL21P134-201ENST00000453468 483 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC025181.1-201ENST00000477507 416 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 RPL31P60-201ENST00000478450 367 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC107032.1-201ENST00000485945 480 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC104108.1-201ENST00000509930 412 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 OR4P1P-201ENST00000530808 1136 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.44□□□□□ -2.18
NEDD8Q15843 MIR3200-201ENST00000580767 85 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 AC109454.4-201ENST00000623411 649 ntBASIC1.44□□□□□ -2.18
NEDD8Q15843 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.44□□□□□ -2.18
NEDD8Q15843 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
NEDD8Q15843 ZNF702P-202ENST00000434269 1966 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD8Q15843 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
NEDD8Q15843 RNU1-62P-201ENST00000362599 164 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 RNA5SP171-201ENST00000391071 115 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC068050.1-201ENST00000394891 380 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AL109913.1-201ENST00000421173 514 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC003685.2-201ENST00000422795 395 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AL356320.1-201ENST00000429616 163 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 Z80107.1-201ENST00000436830 412 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 HSPE1P21-201ENST00000438283 308 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC096638.1-201ENST00000444678 216 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 DNAJC19P8-201ENST00000452887 259 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 HMGN3P1-201ENST00000453847 193 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AP001486.1-201ENST00000463339 476 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC004924.1-201ENST00000480160 781 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC069528.1-202ENST00000482888 637 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 MTCO1P31-201ENST00000506355 492 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.43□□□□□ -2.18
NEDD8Q15843 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 EIF4BP1-201ENST00000554881 351 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.43□□□□□ -2.18
NEDD8Q15843 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC010738.1-201ENST00000604970 987 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC007038.2-201ENST00000608095 740 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 LINC00216-201ENST00000623548 1126 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD8Q15843 AC083865.1-201ENST00000636634 831 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 NUP58P1-201ENST00000502546 1738 ntBASIC1.43□□□□□ -2.18
NEDD8Q15843 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
NEDD8Q15843 DEFB108F-201ENST00000344638 222 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 RNU6-1339P-201ENST00000363574 91 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 MCTS2P-201ENST00000394552 546 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 NPM1P10-201ENST00000398310 865 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 MIR1290-201ENST00000408735 78 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AL445183.3-201ENST00000414168 502 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 RPS7P9-201ENST00000414704 586 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AC099548.1-201ENST00000421443 426 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.42□□□□□ -2.18
NEDD8Q15843 HMGB1P9-201ENST00000429856 646 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NEDD8Q15843 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NEDD8Q15843 RPS26P30-201ENST00000443431 335 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
NEDD8Q15843 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.42□□□□□ -2.18
NEDD8Q15843 AC104164.3-201ENST00000467363 1258 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AC140059.1-201ENST00000489238 361 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.42□□□□□ -2.18
NEDD8Q15843 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.42□□□□□ -2.18
NEDD8Q15843 RNU6-27P-201ENST00000516146 107 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 RNU6-1282P-201ENST00000516735 96 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 HMGB1P1-201ENST00000522557 636 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 DEFB108D-201ENST00000527787 222 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 OR5AL2P-201ENST00000532185 920 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.42□□□□□ -2.18
NEDD8Q15843 AC074051.3-201ENST00000570238 358 ntBASIC1.42□□□□□ -2.18
NEDD8Q15843 MIR1273D-201ENST00000577266 86 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms