Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC012119.1-201ENST00000603184 222 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AC096772.1-201ENST00000609146 564 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 U6.104-201ENST00000637979 90 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 PCAT14-202ENST00000627127 3935 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SOX4Q06945 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 AC007529.1-201ENST00000418574 2178 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 AC008669.1-201ENST00000565823 2178 ntBASIC4.94□□□□□ -1.62
SOX4Q06945 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SOX4Q06945 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
SOX4Q06945 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SOX4Q06945 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SOX4Q06945 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SOX4Q06945 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX4Q06945 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SOX4Q06945 RNU6-190P-201ENST00000384154 102 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RNU6-45P-201ENST00000384471 107 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 Y_RNA.562-201ENST00000384695 113 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RNU6-33P-201ENST00000384793 107 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 Y_RNA.577-201ENST00000384794 101 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 Z98745.1-201ENST00000402553 494 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RNU6-1156P-201ENST00000410365 100 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC092809.3-201ENST00000415453 231 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 SYF2P2-201ENST00000417620 583 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RPL21P91-201ENST00000429231 479 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC000374.1-201ENST00000434698 1745 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX4Q06945 RPS3AP12-201ENST00000443616 753 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AL590664.1-201ENST00000448065 339 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RPL7L1P1-201ENST00000448259 785 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AL031274.1-201ENST00000450334 232 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX4Q06945 MTND4LP30-201ENST00000454092 297 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 ISCUP1-201ENST00000454451 448 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 FTH1P2-201ENST00000466086 412 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RPL21P126-201ENST00000470049 478 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.93□□□□□ -1.62
SOX4Q06945 AC093852.1-201ENST00000503587 266 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX4Q06945 AP006587.4-201ENST00000526053 529 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.93□□□□□ -1.62
SOX4Q06945 RRN3P3-201ENST00000549207 578 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 MIR4284-201ENST00000578924 81 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 ELOCP5-201ENST00000604924 333 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AL356218.2-201ENST00000605264 187 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC002044.1-201ENST00000606707 158 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 AC116447.1-201ENST00000613153 453 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 MUC2-202ENST00000613187 4845 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 AL672167.1-204ENST00000641875 3017 ntBASIC4.93□□□□□ -1.62
SOX4Q06945 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SOX4Q06945 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SOX4Q06945 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SOX4Q06945 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SOX4Q06945 Y_RNA.26-201ENST00000362539 101 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 Y_RNA.64-201ENST00000362845 102 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 RNU4-44P-201ENST00000363050 141 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 RNU4-42P-201ENST00000364738 142 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC068538.1-201ENST00000376856 336 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 RNU6-339P-201ENST00000384310 107 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 Y_RNA.551-201ENST00000384661 102 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AL080315.1-201ENST00000406055 466 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX4Q06945 BX276092.3-201ENST00000424182 230 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC091390.1-201ENST00000433904 331 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 CYCSP43-201ENST00000438233 310 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 NEFMP1-201ENST00000443423 1006 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX4Q06945 MTCO3P8-201ENST00000453691 755 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.92□□□□□ -1.62
SOX4Q06945 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX4Q06945 RNU7-138P-201ENST00000459479 64 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC087385.1-201ENST00000475062 312 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX4Q06945 VN1R105P-201ENST00000486595 910 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.92□□□□□ -1.62
SOX4Q06945 AC005798.1-201ENST00000513715 387 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 SNORA25.11-201ENST00000515935 105 ntBASIC4.92□□□□□ -1.62
SOX4Q06945 Y_RNA.673-201ENST00000516306 88 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms