Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC104308.1-201ENST00000454621 333 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC128713.1-201ENST00000471495 306 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AP003497.1-201ENST00000528472 562 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.08□□□□□ -1.92
GABPAQ06546 OR7K1P-201ENST00000546439 926 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.08□□□□□ -1.92
GABPAQ06546 ZNF321P-202ENST00000550843 495 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC027176.1-201ENST00000560204 514 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC136618.2-201ENST00000575091 400 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 BNIP3P23-201ENST00000599655 511 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC079089.3-201ENST00000603094 673 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC026790.2-201ENST00000606282 430 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AC103710.4-201ENST00000609301 899 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
GABPAQ06546 AC110774.1-201ENST00000623567 2018 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC008264.2-201ENST00000610193 3731 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
GABPAQ06546 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
GABPAQ06546 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.07□□□□□ -1.92
GABPAQ06546 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
GABPAQ06546 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GABPAQ06546 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.07□□□□□ -1.92
GABPAQ06546 DPPA2P1-201ENST00000428060 556 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AC011816.1-201ENST00000441346 546 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AP000542.1-201ENST00000448473 371 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 OR6C5P-201ENST00000452388 923 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.07□□□□□ -1.92
GABPAQ06546 AC103975.1-201ENST00000482506 483 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 LINC00888-204ENST00000487386 421 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 LTV1P1-201ENST00000510683 1237 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GABPAQ06546 DEFB108D-201ENST00000527787 222 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.07□□□□□ -1.92
GABPAQ06546 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.07□□□□□ -1.92
GABPAQ06546 AL357094.1-201ENST00000603845 844 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.07□□□□□ -1.92
GABPAQ06546 AL390240.1-201ENST00000612950 384 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AC017037.3-201ENST00000625016 472 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.07□□□□□ -1.92
GABPAQ06546 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.07□□□□□ -1.92
GABPAQ06546 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
GABPAQ06546 AL391994.1-201ENST00000254724 282 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GABPAQ06546 SNORA51.4-201ENST00000364993 124 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 MIR518C-201ENST00000384822 101 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 MIR493-201ENST00000385254 89 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL590084.2-201ENST00000401481 382 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL354719.1-201ENST00000406535 843 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 RN7SKP266-201ENST00000410232 287 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC109780.2-201ENST00000413467 845 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 HMGB1P11-201ENST00000413899 637 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
GABPAQ06546 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 RPL21P32-201ENST00000419877 477 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC090774.1-201ENST00000435925 246 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 RPL26P6-201ENST00000440913 438 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 RPL17P49-201ENST00000443728 411 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL606662.1-201ENST00000445763 553 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC072039.1-201ENST00000477611 581 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 RPL31P60-201ENST00000478450 367 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC034222.1-201ENST00000494052 532 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC106872.3-201ENST00000495104 446 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 POU5F1P7-201ENST00000508759 541 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 RNA5SP320-201ENST00000516263 124 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 SNORA70.16-201ENST00000516390 95 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 ERHP1-201ENST00000523006 310 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC005832.2-201ENST00000538921 1430 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.06□□□□□ -1.92
GABPAQ06546 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 AC021171.1-201ENST00000603137 706 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AC004067.1-201ENST00000608733 700 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 AL031667.3-201ENST00000620124 655 ntBASIC3.06□□□□□ -1.92
GABPAQ06546 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.06□□□□□ -1.92
GABPAQ06546 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.06□□□□□ -1.92
GABPAQ06546 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
GABPAQ06546 AC007336.1-201ENST00000576365 3828 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 MTND4P16-201ENST00000466108 1367 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 SNORD62.1-201ENST00000362541 86 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 Y_RNA.302-201ENST00000364997 102 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 RNU6-637P-201ENST00000384050 107 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 RNU6-76P-201ENST00000384060 104 ntBASIC3.05□□□□□ -1.92
GABPAQ06546 TAS2R15P-201ENST00000390674 928 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms