Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP289-201ENST00000362332 137 ntBASIC2.2□□□□□ -2.06
TPM4P67936 U3.12-201ENST00000364498 214 ntBASIC2.2□□□□□ -2.06
TPM4P67936 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
TPM4P67936 SNORD65C-201ENST00000390962 71 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AL136133.1-201ENST00000413694 376 ntBASIC2.2□□□□□ -2.06
TPM4P67936 CYCSP48-201ENST00000417124 323 ntBASIC2.2□□□□□ -2.06
TPM4P67936 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM4P67936 AC018630.2-202ENST00000422992 927 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM4P67936 Z82210.1-201ENST00000440037 231 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AL831737.1-201ENST00000441288 271 ntBASIC2.2□□□□□ -2.06
TPM4P67936 USP9YP34-201ENST00000453983 808 ntBASIC2.2□□□□□ -2.06
TPM4P67936 CDC42P1-201ENST00000456658 548 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC090453.1-201ENST00000495560 436 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC104090.1-201ENST00000506341 1171 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC118282.2-201ENST00000508739 374 ntBASIC2.2□□□□□ -2.06
TPM4P67936 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM4P67936 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM4P67936 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM4P67936 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.2□□□□□ -2.06
TPM4P67936 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.2□□□□□ -2.06
TPM4P67936 AP001317.1-201ENST00000531194 960 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC010186.2-204ENST00000537668 439 ntBASIC2.2□□□□□ -2.06
TPM4P67936 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TPM4P67936 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.2□□□□□ -2.06
TPM4P67936 MTCO1P40-201ENST00000574371 625 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AL161423.1-201ENST00000613700 262 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AL392048.1-201ENST00000613946 534 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AL162373.1-201ENST00000620433 407 ntBASIC2.2□□□□□ -2.06
TPM4P67936 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.2□□□□□ -2.06
TPM4P67936 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TPM4P67936 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
TPM4P67936 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.2□□□□□ -2.06
TPM4P67936 AC006020.1-201ENST00000420179 1854 ntBASIC2.2□□□□□ -2.06
TPM4P67936 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TPM4P67936 AC005832.2-201ENST00000538921 1430 ntBASIC2.19□□□□□ -2.06
TPM4P67936 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TPM4P67936 OR1L1-202ENST00000373686 1083 ntBASIC2.19□□□□□ -2.06
TPM4P67936 SNORA46.1-201ENST00000391069 153 ntBASIC2.19□□□□□ -2.06
TPM4P67936 U3.26-201ENST00000391236 204 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AL445529.1-201ENST00000398713 389 ntBASIC2.19□□□□□ -2.06
TPM4P67936 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TPM4P67936 AL356131.1-201ENST00000405826 414 ntBASIC2.19□□□□□ -2.06
TPM4P67936 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM4P67936 EIF1AXP1-201ENST00000419267 435 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AL109913.1-201ENST00000421173 514 ntBASIC2.19□□□□□ -2.06
TPM4P67936 HMGB1P9-201ENST00000429856 646 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.19□□□□□ -2.06
TPM4P67936 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AC072039.1-201ENST00000477611 581 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AC105252.1-201ENST00000503089 286 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM4P67936 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
TPM4P67936 CYCSP26-201ENST00000534107 320 ntBASIC2.19□□□□□ -2.06
TPM4P67936 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM4P67936 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM4P67936 AC068313.1-201ENST00000604028 1008 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AL161729.4-201ENST00000604650 476 ntBASIC2.19□□□□□ -2.06
TPM4P67936 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.19□□□□□ -2.06
TPM4P67936 AP001486.3-201ENST00000615334 372 ntBASIC2.19□□□□□ -2.06
TPM4P67936 AC026634.1-201ENST00000634369 198 ntBASIC2.19□□□□□ -2.06
TPM4P67936 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TPM4P67936 MTND5P6-201ENST00000422338 1798 ntBASIC2.18□□□□□ -2.06
TPM4P67936 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TPM4P67936 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
TPM4P67936 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC023141.4-201ENST00000412031 328 ntBASIC2.18□□□□□ -2.06
TPM4P67936 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.18□□□□□ -2.06
TPM4P67936 RAC1P8-201ENST00000427086 527 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 RPS15AP5-201ENST00000436276 388 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 AC114781.4-201ENST00000513707 639 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.18□□□□□ -2.06
TPM4P67936 AP003066.2-201ENST00000529375 555 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC067805.1-201ENST00000559344 470 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC009097.3-201ENST00000563557 1018 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AL049838.1-201ENST00000563647 981 ntBASIC2.18□□□□□ -2.06
TPM4P67936 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.18□□□□□ -2.06
TPM4P67936 DUXAP11-201ENST00000603858 526 ntBASIC2.18□□□□□ -2.06
TPM4P67936 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TPM4P67936 AC083799.1-201ENST00000366451 910 ntBASIC2.17□□□□□ -2.06
TPM4P67936 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TPM4P67936 RNU6-657P-201ENST00000383904 107 ntBASIC2.17□□□□□ -2.06
TPM4P67936 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TPM4P67936 RNU6-750P-201ENST00000390946 107 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AL139156.1-201ENST00000412785 841 ntBASIC2.17□□□□□ -2.06
TPM4P67936 MICF-203ENST00000432679 129 ntBASIC2.17□□□□□ -2.06
TPM4P67936 RNFT1P2-201ENST00000443064 757 ntBASIC2.17□□□□□ -2.06
TPM4P67936 PSPHP1-201ENST00000450062 261 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AL353691.1-201ENST00000451332 387 ntBASIC2.17□□□□□ -2.06
TPM4P67936 MTCO3P11-201ENST00000455103 774 ntBASIC2.17□□□□□ -2.06
TPM4P67936 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.17□□□□□ -2.06
TPM4P67936 AC128713.1-201ENST00000471495 306 ntBASIC2.17□□□□□ -2.06
TPM4P67936 HMGN1P28-201ENST00000521340 364 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms