Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MIR4287-201ENST00000579398 78 ntBASIC1.43□□□□□ -2.18
LSM3P62310 AC015688.2-201ENST00000584523 262 ntBASIC1.43□□□□□ -2.18
LSM3P62310 AC007229.1-201ENST00000590455 412 ntBASIC1.43□□□□□ -2.18
LSM3P62310 AC008121.1-201ENST00000603244 268 ntBASIC1.43□□□□□ -2.18
LSM3P62310 BNIP3P4-201ENST00000604946 565 ntBASIC1.43□□□□□ -2.18
LSM3P62310 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
LSM3P62310 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.43□□□□□ -2.18
LSM3P62310 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.43□□□□□ -2.18
LSM3P62310 DEFB108F-201ENST00000344638 222 ntBASIC1.42□□□□□ -2.18
LSM3P62310 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
LSM3P62310 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.42□□□□□ -2.18
LSM3P62310 AC074117.2-201ENST00000417130 397 ntBASIC1.42□□□□□ -2.18
LSM3P62310 Z80107.1-201ENST00000436830 412 ntBASIC1.42□□□□□ -2.18
LSM3P62310 HSPE1P21-201ENST00000438283 308 ntBASIC1.42□□□□□ -2.18
LSM3P62310 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
LSM3P62310 AC096638.1-201ENST00000444678 216 ntBASIC1.42□□□□□ -2.18
LSM3P62310 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.42□□□□□ -2.18
LSM3P62310 SETP6-201ENST00000479329 568 ntBASIC1.42□□□□□ -2.18
LSM3P62310 AC069528.1-202ENST00000482888 637 ntBASIC1.42□□□□□ -2.18
LSM3P62310 AC020699.1-201ENST00000505161 445 ntBASIC1.42□□□□□ -2.18
LSM3P62310 RNU5F-8P-201ENST00000515941 111 ntBASIC1.42□□□□□ -2.18
LSM3P62310 DEFB108D-201ENST00000527787 222 ntBASIC1.42□□□□□ -2.18
LSM3P62310 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.42□□□□□ -2.18
LSM3P62310 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.42□□□□□ -2.18
LSM3P62310 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.42□□□□□ -2.18
LSM3P62310 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.42□□□□□ -2.18
LSM3P62310 AL020997.3-201ENST00000602843 359 ntBASIC1.42□□□□□ -2.18
LSM3P62310 MIR6130-201ENST00000619419 109 ntBASIC1.42□□□□□ -2.18
LSM3P62310 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.42□□□□□ -2.18
LSM3P62310 AP001002.2-201ENST00000625137 386 ntBASIC1.42□□□□□ -2.18
LSM3P62310 ZNF663P-202ENST00000641770 1131 ntBASIC1.42□□□□□ -2.18
LSM3P62310 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.42□□□□□ -2.18
LSM3P62310 SNORD51-201ENST00000384320 80 ntBASIC1.41□□□□□ -2.18
LSM3P62310 SNORA48.7-201ENST00000391302 135 ntBASIC1.41□□□□□ -2.18
LSM3P62310 MCTS2P-201ENST00000394552 546 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AL355615.1-201ENST00000406187 641 ntBASIC1.41□□□□□ -2.18
LSM3P62310 RNU2-47P-201ENST00000410649 186 ntBASIC1.41□□□□□ -2.18
LSM3P62310 SPA17P1-201ENST00000416656 452 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 AC096920.1-201ENST00000423991 241 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM3P62310 MTND2P21-201ENST00000436242 1042 ntBASIC1.41□□□□□ -2.18
LSM3P62310 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LSM3P62310 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 AC104685.1-201ENST00000502445 371 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM3P62310 AC113420.1-201ENST00000507903 571 ntBASIC1.41□□□□□ -2.18
LSM3P62310 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM3P62310 SNORA31.6-201ENST00000516241 130 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.41□□□□□ -2.18
LSM3P62310 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.41□□□□□ -2.18
LSM3P62310 AP005435.4-201ENST00000529514 284 ntBASIC1.41□□□□□ -2.18
LSM3P62310 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.41□□□□□ -2.18
LSM3P62310 LSM6P2-201ENST00000552208 177 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AC110588.1-201ENST00000559699 137 ntBASIC1.41□□□□□ -2.18
LSM3P62310 MIR3921-201ENST00000577308 85 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.41□□□□□ -2.18
LSM3P62310 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.41□□□□□ -2.18
LSM3P62310 MTND4LP5-201ENST00000605152 292 ntBASIC1.41□□□□□ -2.18
LSM3P62310 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.41□□□□□ -2.18
LSM3P62310 AL627230.6-201ENST00000611129 280 ntBASIC1.41□□□□□ -2.18
LSM3P62310 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
LSM3P62310 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.4□□□□□ -2.18
LSM3P62310 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC023141.4-201ENST00000412031 328 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AL356320.1-201ENST00000429616 163 ntBASIC1.4□□□□□ -2.19
LSM3P62310 RPL31P54-201ENST00000429803 370 ntBASIC1.4□□□□□ -2.19
LSM3P62310 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.4□□□□□ -2.19
LSM3P62310 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 BMI1P1-201ENST00000445879 941 ntBASIC1.4□□□□□ -2.19
LSM3P62310 HMGN3P1-201ENST00000453847 193 ntBASIC1.4□□□□□ -2.19
LSM3P62310 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AC092436.1-201ENST00000506450 503 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC022447.3-201ENST00000506865 495 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC096745.1-201ENST00000509945 370 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.4□□□□□ -2.19
LSM3P62310 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.4□□□□□ -2.19
LSM3P62310 TRAV11-201ENST00000539512 339 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.4□□□□□ -2.19
LSM3P62310 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.4□□□□□ -2.19
LSM3P62310 CYCSP2-201ENST00000558168 301 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AC027104.1-201ENST00000563702 681 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.4□□□□□ -2.19
LSM3P62310 MIR1273D-201ENST00000577266 86 ntBASIC1.4□□□□□ -2.19
LSM3P62310 MIR4299-201ENST00000577899 72 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
LSM3P62310 AC107905.1-201ENST00000616204 426 ntBASIC1.4□□□□□ -2.19
LSM3P62310 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.4□□□□□ -2.19
LSM3P62310 AC025048.6-202ENST00000627667 438 ntBASIC1.4□□□□□ -2.19
LSM3P62310 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms