Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.81□□□□□ -1.8
MMP13P45452 AC010928.3-201ENST00000587712 541 ntBASIC3.81□□□□□ -1.8
MMP13P45452 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP13P45452 AC010525.2-201ENST00000590920 195 ntBASIC3.81□□□□□ -1.8
MMP13P45452 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP13P45452 AC007566.2-201ENST00000603642 413 ntBASIC3.81□□□□□ -1.8
MMP13P45452 Z84480.1-201ENST00000605131 311 ntBASIC3.81□□□□□ -1.8
MMP13P45452 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.81□□□□□ -1.8
MMP13P45452 AC090617.10-201ENST00000624308 134 ntBASIC3.81□□□□□ -1.8
MMP13P45452 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP13P45452 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.81□□□□□ -1.8
MMP13P45452 AC100810.6-201ENST00000638068 285 ntBASIC3.81□□□□□ -1.8
MMP13P45452 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
MMP13P45452 AC130650.2-201ENST00000618736 2403 ntBASIC3.81□□□□□ -1.8
MMP13P45452 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MMP13P45452 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
MMP13P45452 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
MMP13P45452 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.8□□□□□ -1.8
MMP13P45452 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP13P45452 RNU6-223P-201ENST00000362830 107 ntBASIC3.8□□□□□ -1.8
MMP13P45452 Y_RNA.166-201ENST00000363730 102 ntBASIC3.8□□□□□ -1.8
MMP13P45452 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 RNU6-1227P-201ENST00000383981 107 ntBASIC3.8□□□□□ -1.8
MMP13P45452 RNU6-74P-201ENST00000384235 107 ntBASIC3.8□□□□□ -1.8
MMP13P45452 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MMP13P45452 SOD2P1-201ENST00000396543 562 ntBASIC3.8□□□□□ -1.8
MMP13P45452 MRPL42P2-201ENST00000403169 426 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL136116.1-201ENST00000403591 381 ntBASIC3.8□□□□□ -1.8
MMP13P45452 MIR1250-201ENST00000408098 113 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC069218.2-201ENST00000411665 344 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC006548.1-201ENST00000427470 102 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AL590233.1-201ENST00000430017 456 ntBASIC3.8□□□□□ -1.8
MMP13P45452 NDUFB1P1-201ENST00000435191 180 ntBASIC3.8□□□□□ -1.8
MMP13P45452 BNIP3P2-201ENST00000441221 577 ntBASIC3.8□□□□□ -1.8
MMP13P45452 USP9YP15-201ENST00000442391 422 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AL136380.1-201ENST00000447970 162 ntBASIC3.8□□□□□ -1.8
MMP13P45452 SNRPGP5-201ENST00000456003 220 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL133162.1-201ENST00000463228 453 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC078817.1-201ENST00000492623 435 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC020893.1-201ENST00000502452 580 ntBASIC3.8□□□□□ -1.8
MMP13P45452 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 RNA5SP337-201ENST00000517007 109 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AP003072.1-201ENST00000531740 145 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP13P45452 SCOCP1-201ENST00000554676 349 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.8□□□□□ -1.8
MMP13P45452 BNIP3P5-201ENST00000562290 498 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC106785.1-201ENST00000565935 262 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP13P45452 AL355375.2-201ENST00000574825 175 ntBASIC3.8□□□□□ -1.8
MMP13P45452 MTCO3P13-201ENST00000577757 781 ntBASIC3.8□□□□□ -1.8
MMP13P45452 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.8□□□□□ -1.8
MMP13P45452 AC011468.4-201ENST00000603942 409 ntBASIC3.8□□□□□ -1.8
MMP13P45452 AC090574.1-201ENST00000623186 233 ntBASIC3.8□□□□□ -1.8
MMP13P45452 CR381572.1-201ENST00000625098 102 ntBASIC3.8□□□□□ -1.8
MMP13P45452 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.8□□□□□ -1.8
MMP13P45452 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MMP13P45452 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MMP13P45452 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP13P45452 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP13P45452 RNU6-1120P-201ENST00000362988 108 ntBASIC3.79□□□□□ -1.8
MMP13P45452 Y_RNA.184-201ENST00000363884 108 ntBASIC3.79□□□□□ -1.8
MMP13P45452 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
MMP13P45452 Y_RNA.460-201ENST00000384255 102 ntBASIC3.79□□□□□ -1.8
MMP13P45452 RNU6-1226P-201ENST00000384317 107 ntBASIC3.79□□□□□ -1.8
MMP13P45452 RNU6-692P-201ENST00000384496 107 ntBASIC3.79□□□□□ -1.8
MMP13P45452 RNU6-606P-201ENST00000384721 111 ntBASIC3.79□□□□□ -1.8
MMP13P45452 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MMP13P45452 AL162578.1-201ENST00000406202 378 ntBASIC3.79□□□□□ -1.8
MMP13P45452 RNA5SP118-201ENST00000410385 109 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP13P45452 AC024082.2-201ENST00000434771 238 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP13P45452 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP13P45452 HSPE1P28-201ENST00000443139 211 ntBASIC3.79□□□□□ -1.8
MMP13P45452 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP13P45452 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.79□□□□□ -1.8
MMP13P45452 PABPC1P3-201ENST00000469174 459 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC055855.1-201ENST00000489563 579 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC034222.1-201ENST00000494052 532 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC005726.1-201ENST00000494679 427 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.79□□□□□ -1.8
MMP13P45452 AC103851.1-201ENST00000506833 274 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP13P45452 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.79□□□□□ -1.8
MMP13P45452 AP003072.2-201ENST00000527756 676 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.79□□□□□ -1.8
MMP13P45452 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.79□□□□□ -1.8
MMP13P45452 AC243972.3-201ENST00000539655 198 ntBASIC3.79□□□□□ -1.8
MMP13P45452 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.79□□□□□ -1.8
MMP13P45452 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms