Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-61P-201ENST00000365528 109 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 Y_RNA.404-201ENST00000383978 102 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 SNORA5.1-201ENST00000384275 131 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AL022722.2-201ENST00000402519 180 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 NDUFS5P1-201ENST00000405668 289 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-628P-201ENST00000410675 107 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 E2F6P2-201ENST00000420708 748 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 CYCSP24-201ENST00000445119 316 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC092451.1-201ENST00000480211 153 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC023424.1-201ENST00000496058 459 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 VN1R104P-201ENST00000505115 1009 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-408P-201ENST00000515910 100 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 RPL23AP53-201ENST00000521854 457 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC126177.3-201ENST00000551839 688 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC040958.1-201ENST00000561102 201 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 IGHV3-29-201ENST00000604817 344 ntBASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
CSB-PGBD3P0DP91 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 SPRR2C-201ENST00000290702 219 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 MIR383-201ENST00000362257 73 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-266P-201ENST00000364225 107 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AP000580.1-201ENST00000404439 358 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 POLHP1-201ENST00000411806 470 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 PDSS1P1-201ENST00000422953 1114 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 VTI1BP4-201ENST00000427516 527 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 HMGB1P9-201ENST00000429856 646 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 RPL21P93-201ENST00000480465 489 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC008526.1-201ENST00000509149 338 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 FTH1P11-201ENST00000517577 551 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AL670379.6-201ENST00000603753 252 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC008162.1-201ENST00000604718 254 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AL670379.1-201ENST00000604752 252 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AL670379.5-201ENST00000605253 252 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AL670379.8-201ENST00000605353 252 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AL670379.7-201ENST00000605823 252 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 SNX18P1Y-201ENST00000616231 511 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 AC034229.5-201ENST00000624258 185 ntBASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CSB-PGBD3P0DP91 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC125257.1-201ENST00000560400 2930 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-874P-201ENST00000362390 105 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 RN7SKP280-201ENST00000364196 304 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 RNU1-132P-201ENST00000364300 164 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 SNORA19-201ENST00000384737 128 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 Y_RNA.576-201ENST00000384781 102 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 SNORA75.6-201ENST00000391318 127 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AL132765.1-201ENST00000434165 553 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 HSFY6P-201ENST00000445573 403 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 ISCUP1-201ENST00000454451 448 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC108078.2-201ENST00000510750 236 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 RNU6-1016P-201ENST00000516689 94 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AP000889.1-201ENST00000530968 660 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AL137161.1-201ENST00000532231 390 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 HNRNPCP4-201ENST00000571636 900 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 MIR4429-201ENST00000580105 73 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC006363.1-201ENST00000603806 463 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC009229.3-201ENST00000608056 282 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC110801.1-201ENST00000623590 212 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 AC116667.1-201ENST00000604855 2072 ntBASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CSB-PGBD3P0DP91 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CSB-PGBD3P0DP91 AC091812.1-201ENST00000432235 1948 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms