Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P09429 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P09429 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGB1P09429 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMGB1P09429 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMGB1P09429 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P09429 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P09429 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGB1P09429 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P09429 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P09429 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB1P09429 RPL7P60-201ENST00000397636 735 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 RN7SKP156-201ENST00000410308 342 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 Y_RNA.598-201ENST00000410480 95 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AL139247.1-201ENST00000422768 325 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AC137499.1-201ENST00000427602 88 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AL591212.2-201ENST00000433923 257 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P09429 CYCSP35-201ENST00000451978 304 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P09429 RNU6-677P-201ENST00000516914 101 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P09429 TGIF1P1-201ENST00000558095 802 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB1P09429 CKS1BP3-201ENST00000600888 237 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AC019159.1-201ENST00000605094 187 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AC026790.2-201ENST00000606282 430 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGB1P09429 AC130324.3-201ENST00000614165 542 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
HMGB1P09429 Z99571.1-201ENST00000636677 394 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 U6.99-201ENST00000637524 83 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 MIR7153-201ENST00000637758 57 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 MIR7515-201ENST00000637837 67 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 AL732372.2-225ENST00000642124 456 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGB1P09429 CR381670.1-201ENST00000624291 1693 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGB1P09429 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P09429 MTND4P4-201ENST00000439033 1366 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 MTND4P35-201ENST00000604257 1375 ntBASIC4.37□□□□□ -1.71
HMGB1P09429 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGB1P09429 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB1P09429 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB1P09429 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB1P09429 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGB1P09429 SNORD56.2-201ENST00000363242 71 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 RPL32P23-201ENST00000397237 405 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HMGB1P09429 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC006989.1-201ENST00000427212 131 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 RPS6P15-201ENST00000431996 751 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 NDUFB1P1-201ENST00000435191 180 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AL513043.1-201ENST00000439124 535 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 AC109486.1-201ENST00000486833 374 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 RPS15AP34-201ENST00000487776 387 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGB1P09429 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 HMGB1P41-201ENST00000520234 440 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGB1P09429 RPL21P5-201ENST00000554662 472 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC099489.2-201ENST00000574976 260 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC024619.4-201ENST00000580924 316 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AC008507.1-201ENST00000587506 734 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 OR1M4P-201ENST00000589199 287 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AL365204.3-201ENST00000612448 685 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 AL732618.1-201ENST00000623251 301 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 OR8B1P-202ENST00000641132 1178 ntBASIC4.36□□□□□ -1.71
HMGB1P09429 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGB1P09429 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGB1P09429 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB1P09429 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.35□□□□□ -1.71
HMGB1P09429 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGB1P09429 AC006504.1-201ENST00000562493 3666 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 RNU6-946P-201ENST00000383878 107 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 MIR627-201ENST00000384979 97 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 RNU6-750P-201ENST00000390946 107 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 HMGB3P12-201ENST00000438745 556 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 FABP5P13-201ENST00000452144 328 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGB1P09429 NDUFB4P2-201ENST00000509515 391 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGB1P09429 FABP5P5-201ENST00000515537 406 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 COX6CP5-201ENST00000527162 228 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AP003122.4-201ENST00000530980 758 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.35□□□□□ -1.71
HMGB1P09429 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGB1P09429 MTND3P12-201ENST00000559068 328 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms