Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RETP07949 SNRPEP3-201ENST00000338402 276 ntBASIC2.6□□□□□ -1.99
RETP07949 Y_RNA.25-201ENST00000362528 102 ntBASIC2.6□□□□□ -1.99
RETP07949 SNORD62.1-201ENST00000362541 86 ntBASIC2.6□□□□□ -1.99
RETP07949 RNU5D-1-201ENST00000363299 116 ntBASIC2.6□□□□□ -1.99
RETP07949 RNU4-68P-201ENST00000364314 141 ntBASIC2.6□□□□□ -1.99
RETP07949 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
RETP07949 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RETP07949 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.6□□□□□ -1.99
RETP07949 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.6□□□□□ -1.99
RETP07949 RPL7P30-201ENST00000420888 709 ntBASIC2.6□□□□□ -1.99
RETP07949 AC007435.1-201ENST00000421086 415 ntBASIC2.6□□□□□ -1.99
RETP07949 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.6□□□□□ -1.99
RETP07949 MTND2P5-201ENST00000432656 1006 ntBASIC2.6□□□□□ -1.99
RETP07949 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.6□□□□□ -1.99
RETP07949 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.6□□□□□ -1.99
RETP07949 EEF1A1P39-201ENST00000440791 250 ntBASIC2.6□□□□□ -1.99
RETP07949 HIGD1AP2-201ENST00000446367 280 ntBASIC2.6□□□□□ -1.99
RETP07949 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.6□□□□□ -1.99
RETP07949 AC092155.2-201ENST00000454675 477 ntBASIC2.6□□□□□ -1.99
RETP07949 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 RPL21P99-201ENST00000480369 423 ntBASIC2.6□□□□□ -1.99
RETP07949 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.6□□□□□ -1.99
RETP07949 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.6□□□□□ -1.99
RETP07949 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.6□□□□□ -1.99
RETP07949 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.6□□□□□ -1.99
RETP07949 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.6□□□□□ -1.99
RETP07949 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.6□□□□□ -1.99
RETP07949 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.6□□□□□ -1.99
RETP07949 AC015688.2-201ENST00000584523 262 ntBASIC2.6□□□□□ -1.99
RETP07949 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
RETP07949 AC021749.1-201ENST00000604322 607 ntBASIC2.6□□□□□ -1.99
RETP07949 AC068787.1-201ENST00000623908 691 ntBASIC2.6□□□□□ -1.99
RETP07949 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.6□□□□□ -1.99
RETP07949 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
RETP07949 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RETP07949 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RETP07949 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
RETP07949 RNU6-906P-201ENST00000384700 70 ntBASIC2.59□□□□□ -1.99
RETP07949 RNU4-26P-201ENST00000410270 107 ntBASIC2.59□□□□□ -1.99
RETP07949 RPS15AP38-201ENST00000413110 372 ntBASIC2.59□□□□□ -1.99
RETP07949 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.59□□□□□ -1.99
RETP07949 AC112220.1-201ENST00000434628 355 ntBASIC2.59□□□□□ -1.99
RETP07949 NANOGP2-201ENST00000435391 727 ntBASIC2.59□□□□□ -1.99
RETP07949 USP9YP22-201ENST00000438971 294 ntBASIC2.59□□□□□ -1.99
RETP07949 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 RPL39P6-201ENST00000448289 150 ntBASIC2.59□□□□□ -1.99
RETP07949 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 PNPLA4P1-201ENST00000458328 305 ntBASIC2.59□□□□□ -1.99
RETP07949 AC108729.1-201ENST00000487812 947 ntBASIC2.59□□□□□ -1.99
RETP07949 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 CDC42P4-201ENST00000510507 563 ntBASIC2.59□□□□□ -1.99
RETP07949 AC087808.1-201ENST00000520501 361 ntBASIC2.59□□□□□ -1.99
RETP07949 AP001372.4-201ENST00000524889 472 ntBASIC2.59□□□□□ -1.99
RETP07949 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.59□□□□□ -1.99
RETP07949 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RETP07949 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 MED28P6-201ENST00000558776 231 ntBASIC2.59□□□□□ -1.99
RETP07949 OR4K8P-201ENST00000578842 1048 ntBASIC2.59□□□□□ -1.99
RETP07949 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RETP07949 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.59□□□□□ -1.99
RETP07949 AC069545.1-201ENST00000605671 358 ntBASIC2.59□□□□□ -1.99
RETP07949 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.59□□□□□ -1.99
RETP07949 BX664608.1-201ENST00000610519 487 ntBASIC2.59□□□□□ -1.99
RETP07949 PISRT1-201ENST00000626175 531 ntBASIC2.59□□□□□ -1.99
RETP07949 AC107982.1-201ENST00000507171 1300 ntBASIC2.59□□□□□ -2
RETP07949 AC109315.1-201ENST00000584143 1347 ntBASIC2.59□□□□□ -2
RETP07949 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RETP07949 AC099786.3-201ENST00000565735 1410 ntBASIC2.59□□□□□ -2
RETP07949 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
RETP07949 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RETP07949 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.58□□□□□ -2
RETP07949 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RETP07949 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
RETP07949 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
RETP07949 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
RETP07949 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.58□□□□□ -2
RETP07949 DHFRP6-201ENST00000401776 268 ntBASIC2.58□□□□□ -2
RETP07949 RPLP0P7-201ENST00000416050 667 ntBASIC2.58□□□□□ -2
RETP07949 AL356320.2-201ENST00000417263 507 ntBASIC2.58□□□□□ -2
RETP07949 Z82209.1-201ENST00000422141 2135 ntBASIC2.58□□□□□ -2
RETP07949 HMGN2P3-201ENST00000433603 273 ntBASIC2.58□□□□□ -2
RETP07949 Z80107.1-201ENST00000436830 412 ntBASIC2.58□□□□□ -2
RETP07949 HMGN2P5-201ENST00000436882 273 ntBASIC2.58□□□□□ -2
RETP07949 RPL23AP74-201ENST00000437246 471 ntBASIC2.58□□□□□ -2
RETP07949 AC092427.1-201ENST00000439177 601 ntBASIC2.58□□□□□ -2
RETP07949 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.58□□□□□ -2
RETP07949 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.58□□□□□ -2
RETP07949 AC005410.1-202ENST00000460347 485 ntBASIC2.58□□□□□ -2
RETP07949 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms