Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 SDHDP6-201ENST00000414693 480 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AL358453.1-201ENST00000422522 250 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.95□□□□□ -1.46
ACTN4O43707 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 AC010326.1-201ENST00000462726 602 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AC006427.1-201ENST00000514359 712 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 HIGD1AP3-201ENST00000515857 278 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AC090022.1-201ENST00000546569 311 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 EDDM3DP-201ENST00000554692 434 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AC008814.1-201ENST00000603797 406 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.95□□□□□ -1.46
ACTN4O43707 RN7SL787P-201ENST00000613000 284 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 PRO1804-201ENST00000623780 2050 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.95□□□□□ -1.46
ACTN4O43707 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.95□□□□□ -1.46
ACTN4O43707 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 AC073136.1-201ENST00000449426 2884 ntBASIC5.95□□□□□ -1.46
ACTN4O43707 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
ACTN4O43707 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
ACTN4O43707 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ACTN4O43707 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC023421.1-201ENST00000590535 1785 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 RNU6-1301P-201ENST00000362724 104 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 RNU6-989P-201ENST00000362756 107 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 U3.6-201ENST00000363622 211 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 RNU6-449P-201ENST00000383914 107 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 Y_RNA.400-201ENST00000383963 111 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ACTN4O43707 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ACTN4O43707 RN7SKP16-201ENST00000410180 299 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 SSXP4-201ENST00000451349 245 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.94□□□□□ -1.46
ACTN4O43707 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 RNU6-919P-201ENST00000516731 104 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC090617.3-201ENST00000573670 475 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ACTN4O43707 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.94□□□□□ -1.46
ACTN4O43707 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 MIR4275-201ENST00000636486 87 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 OR9K1P-202ENST00000641111 3217 ntBASIC5.94□□□□□ -1.46
ACTN4O43707 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
ACTN4O43707 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ACTN4O43707 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ACTN4O43707 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 RNU6-153P-201ENST00000364422 104 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RN7SKP227-201ENST00000364445 330 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RNA5SP205-201ENST00000364653 136 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RN7SKP153-201ENST00000365026 316 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ACTN4O43707 AC019155.1-201ENST00000382242 574 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 HSPA8P15-201ENST00000401676 786 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RNA5SP487-201ENST00000410186 122 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RNU4-30P-201ENST00000410245 143 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RN7SKP114-201ENST00000410327 279 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 SNORD56-201ENST00000413522 71 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 PPP1R11P2-201ENST00000423543 382 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 RPS29P14-201ENST00000431518 171 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.93□□□□□ -1.46
ACTN4O43707 AC090774.1-201ENST00000435925 246 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 AL163193.1-201ENST00000444895 788 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 PPIAP19-201ENST00000486414 492 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.93□□□□□ -1.46
ACTN4O43707 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 RNU6-612P-201ENST00000516909 102 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 FTH1P11-201ENST00000517577 551 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.93□□□□□ -1.46
ACTN4O43707 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.93□□□□□ -1.46
ACTN4O43707 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.93□□□□□ -1.46
ACTN4O43707 MIR4308-201ENST00000580634 81 ntBASIC5.93□□□□□ -1.46
ACTN4O43707 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.93□□□□□ -1.46
ACTN4O43707 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.93□□□□□ -1.46
ACTN4O43707 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms