Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 AL031119.1-201ENST00000404707 1879 ntBASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX11Q9Y5W9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SNORD51-201ENST00000384320 80 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU1-82P-201ENST00000390851 165 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU6-1156P-201ENST00000410365 100 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RPS23P10-201ENST00000416185 486 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RPL12P34-201ENST00000424532 479 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 PIGPP3-201ENST00000425307 415 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 EEF1A1P1-201ENST00000447052 739 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU7-169P-201ENST00000459456 61 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 PPIAP21-201ENST00000464473 501 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 FO393415.2-201ENST00000480085 343 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RPL17P19-201ENST00000489069 552 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC018437.1-201ENST00000492214 406 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU6-390P-201ENST00000516259 103 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU1-6P-201ENST00000516290 144 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 RNU6-111P-201ENST00000517179 105 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AP003385.6-201ENST00000531603 374 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SETP7-201ENST00000552169 453 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AL020997.2-201ENST00000602607 184 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC002044.1-201ENST00000606707 158 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 TUG1_2.1-201ENST00000614234 87 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 AC007998.5-201ENST00000622938 237 ntBASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNX11Q9Y5W9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 Y_RNA.19-201ENST00000362462 99 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RN7SKP227-201ENST00000364445 330 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RNU6-1303P-201ENST00000364841 107 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RNU6-1093P-201ENST00000391194 107 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AL445529.1-201ENST00000398713 389 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RNU4-65P-201ENST00000410473 140 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RPS15AP40-201ENST00000419621 391 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC004975.1-201ENST00000428733 208 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AL645568.3-201ENST00000433683 316 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RPS17P8-201ENST00000434525 335 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC234775.1-201ENST00000454247 670 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC011005.2-201ENST00000487324 359 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 SNORA25.11-201ENST00000515935 105 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 SNORA40.14-201ENST00000516543 86 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC104576.1-201ENST00000524225 88 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RN7SL652P-201ENST00000577769 300 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 SNORA74C-1-201ENST00000580726 201 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 AC012119.1-201ENST00000603184 222 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 ELOCP5-201ENST00000604924 333 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 RAC1P9-201ENST00000604990 392 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 HMGN2P28-201ENST00000606102 262 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 TLK1P1-201ENST00000456760 2440 ntBASIC4.69□□□□□ -1.66
SNX11Q9Y5W9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms