Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC245054.2-201ENST00000415639 319 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 SPA17P1-201ENST00000416656 452 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC008850.1-201ENST00000427546 362 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC092798.1-201ENST00000458542 409 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 RPS29P2-201ENST00000479278 136 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 RPS3AP22-201ENST00000488297 769 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 CDC42P4-201ENST00000510507 563 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC008885.1-201ENST00000514930 301 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-840P-201ENST00000517275 65 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC007954.1-201ENST00000554198 494 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 MTND3P12-201ENST00000559068 328 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AP001004.1-201ENST00000582468 324 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 NIFKP6-201ENST00000598115 845 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC013553.2-201ENST00000604244 589 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AL160281.1-201ENST00000605307 311 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AC091965.4-201ENST00000607691 587 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AP000676.3-201ENST00000623299 569 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
ATG4BQ9Y4P1 AL138713.1-201ENST00000624026 2130 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MTND5P7-201ENST00000413558 1798 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MIR422A-201ENST00000362286 90 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 RNU6-432P-201ENST00000384196 109 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 U8.14-201ENST00000390843 143 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 RN7SKP220-201ENST00000410611 288 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 OR2AS1P-201ENST00000427827 319 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 UBE2D3P1-201ENST00000436669 444 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 RPL7P36-201ENST00000444633 681 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 TPT1P14-201ENST00000448018 505 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL162389.1-201ENST00000449233 177 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MTND2P24-201ENST00000453434 806 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AP1S2P1-201ENST00000457344 379 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 RPS20P20-201ENST00000460498 340 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC104472.2-201ENST00000469035 601 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 OR2A20P-203ENST00000498397 1268 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC098862.1-201ENST00000504991 413 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 MRPS33P3-201ENST00000513456 322 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 RNA5SP341-201ENST00000516261 117 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC026407.1-201ENST00000518369 204 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL355836.1-201ENST00000555951 870 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC145350.1-201ENST00000567426 208 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 BCRP9-201ENST00000605312 388 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC018638.7-201ENST00000605836 1114 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC004832.5-201ENST00000608677 401 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL162274.2-201ENST00000614406 332 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC007318.2-201ENST00000620999 243 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC120349.3-201ENST00000624377 529 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AC079416.3-201ENST00000624479 549 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 AL049641.1-201ENST00000441055 1948 ntBASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
ATG4BQ9Y4P1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
ATG4BQ9Y4P1 AC007785.2-201ENST00000598627 1916 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms