Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL049641.1-201ENST00000441055 1948 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RNU6-609P-201ENST00000365459 107 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RNU4-52P-201ENST00000384209 138 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 SNORA36C-201ENST00000384289 132 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 Y_RNA.510-201ENST00000384511 114 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 Y_RNA.548-201ENST00000384656 105 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL355497.1-201ENST00000406262 551 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL450338.1-201ENST00000407987 512 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RN7SKP140-201ENST00000411196 284 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC018630.2-202ENST00000422992 927 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 NANOGP5-201ENST00000424456 877 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 OR4K11P-201ENST00000431829 904 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 FGF7P5-201ENST00000441829 291 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RPL39P6-201ENST00000448289 150 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RPS15AP27-201ENST00000449183 343 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC090515.1-201ENST00000465295 476 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 MTND4LP3-201ENST00000468320 276 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RPL31P50-201ENST00000471002 296 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC098799.1-201ENST00000504752 800 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC069306.1-201ENST00000507006 843 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC234781.5-201ENST00000508429 271 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC027338.1-201ENST00000514840 825 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 RNU6-1261P-201ENST00000517194 104 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC138915.2-201ENST00000569776 97 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 SNORD53-201ENST00000579969 78 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 MIR3117-201ENST00000584034 78 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL022067.1-201ENST00000602426 454 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC068313.1-201ENST00000604028 1008 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AP005229.2-201ENST00000609980 697 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC010975.3-201ENST00000618727 978 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 AC084824.4-201ENST00000620106 731 ntBASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.66□□□□□ -2.14
HHLA3Q9XRX5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
HHLA3Q9XRX5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC022336.2-201ENST00000568966 2538 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 SNRPEP3-201ENST00000338402 276 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 MIR506-201ENST00000384998 124 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AL358075.3-201ENST00000426289 226 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC093155.1-201ENST00000440164 826 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 BMI1P1-201ENST00000445879 941 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 RPL23AP49-201ENST00000492925 468 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 TMEM251P1-201ENST00000503717 318 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 SUMO2P6-201ENST00000505273 288 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 SCARNA15.2-201ENST00000516409 127 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AP002748.2-201ENST00000528671 348 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC087276.1-201ENST00000529659 480 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 TRAV28-201ENST00000557548 323 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC009097.3-201ENST00000563557 1018 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 MIR4658-201ENST00000584344 65 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC005776.1-201ENST00000603164 290 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 BNIP3P19-201ENST00000605397 577 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AL121917.1-203ENST00000605534 577 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC004067.1-201ENST00000608733 700 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC103710.4-201ENST00000609301 899 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC046143.2-201ENST00000609789 160 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AP003399.1-201ENST00000637534 361 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AC016717.2-201ENST00000609089 5141 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 AL022578.1-201ENST00000439330 1433 ntBASIC1.65□□□□□ -2.15
HHLA3Q9XRX5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
HHLA3Q9XRX5 AC007785.2-201ENST00000598627 1916 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms