Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 U3.44-201ENST00000458938 192 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC107401.1-201ENST00000503426 685 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC004062.1-201ENST00000509926 645 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RN7SKP209-201ENST00000516888 304 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC107934.1-201ENST00000522215 217 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 DUXAP4-201ENST00000603046 613 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC092794.1-201ENST00000612734 582 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 MIR7112-201ENST00000616126 65 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC072046.2-201ENST00000618366 268 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AC091953.2-201ENST00000623979 160 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 AL359757.2-201ENST00000624309 274 ntBASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HDAC9Q9UKV0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 FCF1P9-201ENST00000412546 282 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ISCA1P6-201ENST00000427740 390 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 UBE2V1P13-201ENST00000436983 439 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC079448.1-201ENST00000449377 373 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC023598.1-201ENST00000472521 361 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ST13P14-201ENST00000474095 734 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 RPL23AP41-201ENST00000484754 458 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC096576.1-201ENST00000489014 359 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 RPL9P6-201ENST00000492764 598 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC020893.1-201ENST00000502452 580 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 KCTD9P5-201ENST00000504141 1170 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC114967.1-201ENST00000504890 259 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC021146.1-201ENST00000511202 716 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 RNU6-528P-201ENST00000516926 100 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AP000907.2-201ENST00000530827 353 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 NRBF2P1-201ENST00000587407 859 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC012669.1-201ENST00000603209 283 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AL022154.1-201ENST00000604698 785 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 HMGB1P50-201ENST00000605814 607 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC138649.3-201ENST00000622154 254 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AL356585.4-201ENST00000623078 1229 ntBASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HDAC9Q9UKV0 ZNF807-201ENST00000328088 1707 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 RNU4-65P-201ENST00000410473 140 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 BX295541.1-201ENST00000417774 250 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 FTH1P1-201ENST00000437933 532 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AF228730.2-201ENST00000438784 848 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC093663.1-201ENST00000497190 394 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC108078.1-201ENST00000508073 725 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC105914.1-201ENST00000511798 226 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC022483.1-201ENST00000514020 567 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 OR5G4P-201ENST00000525251 760 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 CR383656.7-201ENST00000548164 174 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 TPRKBP2-201ENST00000565969 475 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 MIR486-1-201ENST00000612171 68 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC091905.1-201ENST00000624400 311 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 AC118273.1-201ENST00000525324 3006 ntBASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HDAC9Q9UKV0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC9Q9UKV0 OR5J1P-201ENST00000313544 939 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms