Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AL162413.1-201ENST00000603198 110 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AL590392.1-201ENST00000604960 446 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC091167.4-201ENST00000605079 184 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC004908.2-201ENST00000609090 574 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC093788.1-201ENST00000609356 927 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC112204.3-201ENST00000623822 332 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 AC091953.2-201ENST00000623979 160 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 MIR6830-201ENST00000636015 70 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 MIR492-201ENST00000638676 116 ntBASIC4.39□□□□□ -1.71
USP25Q9UHP3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP25Q9UHP3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP25Q9UHP3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP25Q9UHP3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU6-223P-201ENST00000362830 107 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU6-432P-201ENST00000384196 109 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU6-1009P-201ENST00000390996 107 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL356776.1-201ENST00000406574 447 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU4-65P-201ENST00000410473 140 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 MTATP6P4-201ENST00000427725 675 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 RPS29P31-201ENST00000446147 164 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 TPT1P14-201ENST00000448018 505 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL162151.2-201ENST00000448875 158 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 NANOGP10-201ENST00000453325 895 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU6-420P-201ENST00000458780 107 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 MTCO2P29-201ENST00000465212 189 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 MTCO1P35-201ENST00000515270 228 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RN7SKP209-201ENST00000516888 304 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 SUMO2P20-201ENST00000520803 283 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 RAB11AP2-201ENST00000545905 639 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL359212.1-201ENST00000556608 614 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 MED28P6-201ENST00000558776 231 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL356432.3-201ENST00000568952 465 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 MIR3167-201ENST00000579623 85 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNU4-89P-201ENST00000607443 133 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL355472.4-201ENST00000610233 626 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 RNVU1-4-201ENST00000612985 164 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AL159972.1-201ENST00000625150 448 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 MIR3662-201ENST00000637030 95 ntBASIC4.38□□□□□ -1.71
USP25Q9UHP3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
USP25Q9UHP3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP25Q9UHP3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP25Q9UHP3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 DDX10P1-201ENST00000448545 1933 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 RNU5E-8P-201ENST00000363502 116 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 RNA5SP130-201ENST00000364431 114 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 RPS4XP8-201ENST00000402039 771 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL391417.1-201ENST00000404100 426 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL356095.1-201ENST00000417217 199 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 MTATP6P18-201ENST00000417994 673 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC135721.1-201ENST00000497954 479 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC026784.1-201ENST00000507986 352 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 MRPL49P2-201ENST00000521066 465 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC107934.1-201ENST00000522215 217 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 DEFB108D-201ENST00000527787 222 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC023575.1-201ENST00000580510 358 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 MIR3939-201ENST00000582614 106 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL035413.2-201ENST00000604801 525 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 AC093838.1-201ENST00000613014 469 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 AL138713.1-201ENST00000624026 2130 ntBASIC4.37□□□□□ -1.71
USP25Q9UHP3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP25Q9UHP3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
USP25Q9UHP3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP25Q9UHP3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
USP25Q9UHP3 AC092326.2-201ENST00000624772 1561 ntBASIC4.36□□□□□ -1.71
USP25Q9UHP3 AC073073.2-201ENST00000609827 2578 ntBASIC4.36□□□□□ -1.71
USP25Q9UHP3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
USP25Q9UHP3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
USP25Q9UHP3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.36□□□□□ -1.71
USP25Q9UHP3 Y_RNA.160-201ENST00000363677 92 ntBASIC4.36□□□□□ -1.71
USP25Q9UHP3 RNY3P3-201ENST00000363816 102 ntBASIC4.36□□□□□ -1.71
USP25Q9UHP3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.36□□□□□ -1.71
USP25Q9UHP3 Y_RNA.279-201ENST00000364763 95 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms