Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.22-201ENST00000362492 102 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RNU6-960P-201ENST00000364056 120 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RNU6-270P-201ENST00000364131 105 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 Y_RNA.559-201ENST00000384686 107 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RNU2-33P-201ENST00000410344 192 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL158071.1-201ENST00000430315 461 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL512844.2-201ENST00000433990 593 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 ARPC3P1-201ENST00000437218 533 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL136380.1-201ENST00000447970 162 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 MTCYBP1-201ENST00000454315 1119 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC087588.1-201ENST00000462203 316 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RPL7P19-201ENST00000469948 618 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RPL30P14-201ENST00000482744 348 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 CEACAMP10-202ENST00000495431 496 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC105252.1-201ENST00000503089 286 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 SCARNA24.1-201ENST00000516465 137 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RNU7-51P-201ENST00000516560 62 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 RNU6-1282P-201ENST00000516735 96 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC087883.1-201ENST00000551882 391 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC087683.1-201ENST00000591187 441 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 SNORA62.6-201ENST00000606322 83 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL161734.1-201ENST00000609720 557 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 MIR6867-201ENST00000610636 67 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC011939.3-201ENST00000613686 466 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC091834.1-201ENST00000614543 472 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC068831.8-201ENST00000620171 435 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL589994.2-201ENST00000621124 579 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 MIR7641-1-201ENST00000627518 61 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC110774.1-201ENST00000623567 2018 ntBASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
CHMP1AQ9HD42 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 FAM35CP-201ENST00000554755 2470 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 OR5H15-201ENST00000383696 930 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 SNORA70C-201ENST00000384538 135 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RNU6-55P-201ENST00000411092 107 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RNU6-954P-201ENST00000411355 107 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL663109.1-201ENST00000411498 844 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL356095.1-201ENST00000417217 199 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 MORF4L1P6-201ENST00000418771 268 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RPL17P36-201ENST00000420302 549 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL589823.1-201ENST00000429577 183 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 MTCO3P5-201ENST00000433620 714 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 Z82210.1-201ENST00000440037 231 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 NEFMP1-201ENST00000443423 1006 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RNA5SP471-201ENST00000516971 106 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 MTCO2P4-201ENST00000517968 247 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC090572.1-201ENST00000519251 160 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL163153.1-201ENST00000554223 283 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC245014.2-201ENST00000603689 287 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.6-201ENST00000603753 252 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.11-201ENST00000604059 253 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC008162.1-201ENST00000604718 254 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.1-201ENST00000604752 252 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.5-201ENST00000605253 252 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.12-201ENST00000605291 253 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.8-201ENST00000605353 252 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC246785.4-201ENST00000605374 287 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL591034.3-201ENST00000605511 685 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AL670379.7-201ENST00000605823 252 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 MIR98-201ENST00000606724 119 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 MIR6716-201ENST00000613413 80 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC034102.8-201ENST00000615146 484 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 FRG1KP-201ENST00000623592 341 ntBASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
CHMP1AQ9HD42 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms