Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AC110801.1-201ENST00000623590 212 ntBASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL25A1Q9BXS0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC010332.2-201ENST00000613083 1904 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 SNORA40-201ENST00000388090 126 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 MIR190B-201ENST00000401119 79 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RPS11P1-201ENST00000451072 473 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AL137159.1-201ENST00000452808 512 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 snoU13.29-201ENST00000459370 104 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RPL37P6-201ENST00000460682 294 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC012123.2-201ENST00000485809 248 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RPL30P11-201ENST00000495304 339 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RNU6-971P-201ENST00000516920 106 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC037487.3-201ENST00000606668 112 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.802-201ENST00000614892 130 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC114781.5-201ENST00000615297 108 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 U1.34-201ENST00000618578 162 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AL031601.2-202ENST00000622650 282 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 OR51H2P-202ENST00000641424 3046 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 AC011933.2-201ENST00000578539 2790 ntBASIC5.27□□□□□ -1.57
COL25A1Q9BXS0 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC110774.1-201ENST00000623567 2018 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RNU6-818P-201ENST00000364837 108 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 CYCSP19-201ENST00000411715 316 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RPS23P10-201ENST00000416185 486 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PTGES3P4-201ENST00000426243 356 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 SNORD2.1-201ENST00000458762 69 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RPL21P41-201ENST00000459863 264 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 Y_RNA.686-201ENST00000516548 134 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 MIR4504-201ENST00000577413 92 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 BDH2P1-201ENST00000602288 736 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC007179.3-201ENST00000604976 235 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 BRDTP1-201ENST00000605735 677 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC006329.2-201ENST00000611491 394 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 SNX18P1Y-201ENST00000616231 511 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 CR392039.4-201ENST00000624968 501 ntBASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL25A1Q9BXS0 AC114774.1-201ENST00000507410 1770 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms