Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.49□□□□□ -1.85
PKP4Q99569 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP4Q99569 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 HMGN1P30-201ENST00000589286 268 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 CKS1BP3-201ENST00000600888 237 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 DUXAP4-201ENST00000603046 613 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AP000907.4-201ENST00000604143 237 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AP001330.4-201ENST00000604350 154 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP4Q99569 AC006338.1-201ENST00000618453 749 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 AC004009.2-201ENST00000623016 728 ntBASIC3.49□□□□□ -1.85
PKP4Q99569 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
PKP4Q99569 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
PKP4Q99569 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKP4Q99569 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKP4Q99569 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.48□□□□□ -1.85
PKP4Q99569 RPS4XP5-202ENST00000449995 1334 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 GNG5P1-201ENST00000255500 204 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 RNU6-343P-201ENST00000364709 104 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 RNU6-744P-201ENST00000365557 107 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 Y_RNA.402-201ENST00000383972 102 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 RNU6-1316P-201ENST00000384242 108 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 SNORA48.7-201ENST00000391302 135 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 DBIP2-201ENST00000419076 262 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PKP4Q99569 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.48□□□□□ -1.85
PKP4Q99569 USP9YP36-201ENST00000424581 829 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP4Q99569 ISCA1P6-201ENST00000427740 390 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC079780.1-201ENST00000428259 207 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP4Q99569 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP4Q99569 RPS3AP50-201ENST00000487064 803 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 HMGB1P36-201ENST00000487709 576 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AP001025.2-201ENST00000490908 477 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 AC034222.1-201ENST00000494052 532 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 COX7A2P2-201ENST00000505291 250 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC104619.4-201ENST00000510773 249 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP4Q99569 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP4Q99569 Y_RNA.672-201ENST00000516289 104 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 TRMT10BP1-201ENST00000519377 943 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.48□□□□□ -1.85
PKP4Q99569 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP4Q99569 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.48□□□□□ -1.85
PKP4Q99569 AC074050.1-201ENST00000563247 211 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 HMGB1P33-201ENST00000563485 527 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC034105.4-201ENST00000568304 277 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC034268.2-201ENST00000571784 482 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC245014.2-201ENST00000603689 287 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC010591.1-201ENST00000603941 649 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC246785.4-201ENST00000605374 287 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 LARP7P1-201ENST00000605576 316 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 RNU6-87P-201ENST00000607561 108 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 AC092794.2-201ENST00000620933 563 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 CR392039.5-201ENST00000623201 510 ntBASIC3.48□□□□□ -1.85
PKP4Q99569 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP4Q99569 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP4Q99569 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PKP4Q99569 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP4Q99569 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.47□□□□□ -1.85
PKP4Q99569 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PKP4Q99569 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PKP4Q99569 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.47□□□□□ -1.85
PKP4Q99569 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PKP4Q99569 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 SNORA62.3-201ENST00000365110 153 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 AL359837.1-201ENST00000381357 287 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 SNORA5A-201ENST00000384111 134 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 RNU6-1103P-201ENST00000384150 107 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 Y_RNA.573-201ENST00000384763 105 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 FGF7P8-201ENST00000402994 292 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 RPL7P25-201ENST00000404151 721 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 U3.39-201ENST00000408569 239 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 RNU6-195P-201ENST00000411352 109 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP4Q99569 AC127526.1-201ENST00000417526 366 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 SYF2P2-201ENST00000417620 583 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP4Q99569 AL109913.1-201ENST00000421173 514 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 AL589872.1-201ENST00000426602 288 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 AC018644.1-201ENST00000429934 551 ntBASIC3.47□□□□□ -1.85
PKP4Q99569 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms