Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC100870.1-201ENST00000522035 505 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP88Q99567 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP88Q99567 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 MED28P6-201ENST00000558776 231 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 MIR3944-201ENST00000581277 108 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 AC006116.10-201ENST00000591836 581 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.31□□□□□ -1.72
NUP88Q99567 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.31□□□□□ -1.72
NUP88Q99567 AP002826.1-201ENST00000608835 315 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 AC019176.2-201ENST00000611579 315 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 AL589994.2-201ENST00000621124 579 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NUP88Q99567 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NUP88Q99567 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.31□□□□□ -1.72
NUP88Q99567 MAPK10-372ENST00000641954 3413 ntBASIC4.31□□□□□ -1.72
NUP88Q99567 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP88Q99567 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP88Q99567 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP88Q99567 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
NUP88Q99567 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NUP88Q99567 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP88Q99567 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP88Q99567 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP88Q99567 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP88Q99567 OR4G2P-201ENST00000328113 903 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 RNU6-50P-201ENST00000362356 103 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 SNORD9-201ENST00000362566 104 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 RNU6-1085P-201ENST00000363576 107 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 RNU6-108P-201ENST00000365558 107 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 MIR183-201ENST00000384958 110 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 CALM2P3-201ENST00000400429 449 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AL359634.1-202ENST00000404721 284 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 RNU2-71P-201ENST00000411395 189 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 MTATP6P18-201ENST00000417994 673 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP88Q99567 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP88Q99567 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP88Q99567 RN7SL293P-201ENST00000481765 281 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 TRBV12-2-201ENST00000489763 344 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC026427.2-201ENST00000506228 536 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC110768.1-201ENST00000509222 400 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC009646.1-201ENST00000510455 318 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 RN7SKP13-201ENST00000515933 244 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 SNORA70.18-201ENST00000516696 98 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP88Q99567 AL355836.1-201ENST00000555951 870 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP88Q99567 RPL23AP84-201ENST00000571193 464 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP88Q99567 SRGNP1-201ENST00000603392 451 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AL391646.1-201ENST00000603860 190 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 U3.45-201ENST00000607547 219 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC090517.2-201ENST00000614966 680 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP88Q99567 U6.105-201ENST00000637379 88 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP88Q99567 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NUP88Q99567 USP8P1-201ENST00000494673 3183 ntBASIC4.3□□□□□ -1.72
NUP88Q99567 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NUP88Q99567 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
NUP88Q99567 DEFB108F-201ENST00000344638 222 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NUP88Q99567 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP88Q99567 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 MIR558-201ENST00000384920 94 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 MIR1-2-201ENST00000384961 85 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 RNA5SP424-201ENST00000390988 115 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 BTF3P7-201ENST00000407097 488 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP88Q99567 RAC1P3-201ENST00000416129 580 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 MTCYBP5-201ENST00000423752 1135 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP88Q99567 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP88Q99567 MTCO2P19-201ENST00000427513 598 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 OR2AS1P-201ENST00000427827 319 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 TIMM9P3-201ENST00000428659 274 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP88Q99567 MTATP6P30-201ENST00000443540 664 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 PRDX3P3-201ENST00000447765 522 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 PRSS3P4-201ENST00000453323 162 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 RN7SL93P-201ENST00000463035 293 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP88Q99567 HSPE1P6-201ENST00000479457 291 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 RN7SL432P-201ENST00000484057 298 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 SNORA31.8-201ENST00000516327 108 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 OR5B10P-201ENST00000532869 642 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP88Q99567 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP88Q99567 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP88Q99567 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP88Q99567 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP88Q99567 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP88Q99567 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
NUP88Q99567 AL670379.6-201ENST00000603753 252 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AL670379.11-201ENST00000604059 253 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AC008162.1-201ENST00000604718 254 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AL670379.1-201ENST00000604752 252 ntBASIC4.29□□□□□ -1.72
NUP88Q99567 AL670379.5-201ENST00000605253 252 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms