Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RPL9P32-201ENST00000464118 620 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC005798.1-201ENST00000513715 387 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC023157.2-201ENST00000540596 141 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC007375.1-201ENST00000554513 578 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC032011.1-201ENST00000611703 1549 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 EIF2AP4-201ENST00000424793 1781 ntBASIC5.88□□□□□ -1.47
CCDC85AQ96PX6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 RNA5SP447-201ENST00000363749 119 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.276-201ENST00000364732 109 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.314-201ENST00000365114 102 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.461-201ENST00000384263 103 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AL139039.1-201ENST00000401900 692 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 NEFMP1-201ENST00000443423 1006 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 RNU6-1132P-201ENST00000459214 107 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 SNORA40.14-201ENST00000516543 86 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.715-201ENST00000517082 110 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AF186190.1-201ENST00000517470 480 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AC125232.2-201ENST00000592457 143 ntBASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC85AQ96PX6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 Y_RNA.515-201ENST00000384535 112 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MIR129-1-201ENST00000384972 72 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MIR1302-6-201ENST00000408466 90 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MRPS18CP6-201ENST00000423587 223 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 CYCSP43-201ENST00000438233 310 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 RN7SL517P-201ENST00000462240 305 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 FTH1P2-201ENST00000466086 412 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC011005.2-201ENST00000487324 359 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC093852.1-201ENST00000503587 266 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 RN7SKP82-201ENST00000516786 223 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC069113.1-201ENST00000517763 267 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 IGHV3-76-201ENST00000522465 295 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 FKBP1BP1-201ENST00000553366 325 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MIR4284-201ENST00000578924 81 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AC078899.3-201ENST00000599065 212 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AL034351.1-201ENST00000605288 668 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 BMS1P21-201ENST00000634565 365 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MIR4275-201ENST00000636486 87 ntBASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC85AQ96PX6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AL359893.1-201ENST00000447628 1580 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNU6-1059P-201ENST00000363752 98 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNU6-842P-201ENST00000384269 107 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNU6-472P-201ENST00000384299 107 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNU6-45P-201ENST00000384471 107 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 MIR659-201ENST00000384963 97 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 MIR517A-201ENST00000385001 87 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNA5SP397-201ENST00000391323 118 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RPL21P1-201ENST00000399532 476 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 MIR1250-201ENST00000408098 113 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RPL7P2-201ENST00000427639 268 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RNU6-953P-201ENST00000459154 107 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 RPS23P7-201ENST00000466210 444 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 HMGB1P25-201ENST00000468402 607 ntBASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC85AQ96PX6 AC092436.3-201ENST00000511788 257 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms