Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC011447.4-201ENST00000587562 111 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.98□□□□□ -1.45
LRCH3Q96II8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 AC018809.2-201ENST00000602436 3823 ntBASIC5.98□□□□□ -1.45
LRCH3Q96II8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LRCH3Q96II8 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 Y_RNA.182-201ENST00000363880 111 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 RNU6-879P-201ENST00000364328 108 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 SNORA16A-201ENST00000384342 137 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 RNU6-239P-201ENST00000390990 99 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 SNORA11.2-201ENST00000408318 127 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 MTATP6P4-201ENST00000427725 675 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 MRPS21P3-201ENST00000436696 262 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 RPS15AP7-201ENST00000439294 405 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 NF1P5-201ENST00000588287 448 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 BPIFA4P-203ENST00000603168 689 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 AL450472.3-201ENST00000615578 367 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 AC090607.5-201ENST00000615692 224 ntBASIC5.97□□□□□ -1.45
LRCH3Q96II8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.97□□□□□ -1.45
LRCH3Q96II8 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
LRCH3Q96II8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.96□□□□□ -1.45
LRCH3Q96II8 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
LRCH3Q96II8 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
LRCH3Q96II8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
LRCH3Q96II8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
LRCH3Q96II8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
LRCH3Q96II8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 RNU4-11P-201ENST00000365287 132 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 RNU6-211P-201ENST00000384047 107 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 MIR135A2-201ENST00000384854 100 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 SNORD12B-201ENST00000410433 91 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 EBAG9P1-201ENST00000418955 543 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 AL451062.2-201ENST00000427515 271 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 RPL23AP3-201ENST00000453844 468 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 AC117440.1-201ENST00000474107 571 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 RPL23AP45-201ENST00000476406 468 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 RPL26P26-201ENST00000480251 434 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 AK3P2-201ENST00000507976 429 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 AC008033.2-201ENST00000542626 177 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 AC127455.1-201ENST00000565496 145 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 AC060766.3-201ENST00000591442 263 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 MIR6780A-201ENST00000615089 68 ntBASIC5.96□□□□□ -1.46
LRCH3Q96II8 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRCH3Q96II8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRCH3Q96II8 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRCH3Q96II8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.96□□□□□ -1.46
LRCH3Q96II8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
LRCH3Q96II8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 RNU6-227P-201ENST00000362865 103 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 RNU6-270P-201ENST00000364131 105 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 RNU6-384P-201ENST00000364900 104 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LRCH3Q96II8 RNU6-843P-201ENST00000384454 104 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.95□□□□□ -1.46
LRCH3Q96II8 AL592045.1-201ENST00000429867 352 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 RPL7L1P1-201ENST00000448259 785 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 RPL10P17-201ENST00000453852 316 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 snoU13.30-201ENST00000458951 104 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 ACA64.4-201ENST00000459070 127 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 snoU13.29-201ENST00000459370 104 ntBASIC5.95□□□□□ -1.46
LRCH3Q96II8 RN7SL352P-201ENST00000466002 277 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms