Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 RPL21P104-201ENST00000464143 478 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 RPS4XP13-201ENST00000483219 789 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 MTND1P3-201ENST00000484956 952 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 RPS15AP36-201ENST00000492022 382 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 SNORA31.8-201ENST00000516327 108 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 RNU6-840P-201ENST00000517275 65 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AP006245.1-201ENST00000522549 120 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AP000857.1-201ENST00000532151 543 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 RPL21P5-201ENST00000554662 472 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 MED28P6-201ENST00000558776 231 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC005771.1-201ENST00000585581 349 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC108747.1-201ENST00000609508 535 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC138749.5-201ENST00000611461 208 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC008121.2-201ENST00000614647 523 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC116165.2-201ENST00000616705 206 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC108479.2-201ENST00000617314 601 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.85□□□□□ -1.79
USP38Q8NB14 AC110994.2-201ENST00000635481 492 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
USP38Q8NB14 TEX21P-201ENST00000447107 1476 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 AC092326.2-201ENST00000624772 1561 ntBASIC3.85□□□□□ -1.79
USP38Q8NB14 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
USP38Q8NB14 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP38Q8NB14 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP38Q8NB14 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 RNY4P16-201ENST00000364768 94 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 RNU6-7-201ENST00000364784 107 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 RNU6-8-201ENST00000365467 107 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
USP38Q8NB14 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AL353777.1-201ENST00000425552 326 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 AL158071.1-201ENST00000430315 461 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 NEK4P1-201ENST00000433383 879 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP38Q8NB14 Z75741.1-201ENST00000446793 314 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 SSXP1-201ENST00000453640 473 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 RN7SL594P-201ENST00000470590 287 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AC093663.1-201ENST00000497190 394 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AC114797.1-201ENST00000514003 728 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.84□□□□□ -1.79
USP38Q8NB14 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.84□□□□□ -1.79
USP38Q8NB14 AL133153.1-201ENST00000557756 303 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 MIR5004-201ENST00000579078 107 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 HMGN1P30-201ENST00000589286 268 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 RNU6-87P-201ENST00000607561 108 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 PLCE1P1-201ENST00000622094 305 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 AL603839.4-201ENST00000624658 1005 ntBASIC3.84□□□□□ -1.79
USP38Q8NB14 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
USP38Q8NB14 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.84□□□□□ -1.79
USP38Q8NB14 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.84□□□□□ -1.8
USP38Q8NB14 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
USP38Q8NB14 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
USP38Q8NB14 AC009812.4-201ENST00000569134 1805 ntBASIC3.84□□□□□ -1.8
USP38Q8NB14 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
USP38Q8NB14 Y_RNA.359-201ENST00000365498 102 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 SNORD115.1-201ENST00000391109 76 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 RN7SKP53-201ENST00000411337 315 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 RPS3AP3-201ENST00000411933 242 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.83□□□□□ -1.8
USP38Q8NB14 RPS15AP12-201ENST00000419498 388 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 MTATP6P4-201ENST00000427725 675 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 RABEPKP1-201ENST00000440529 1026 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AL022238.1-201ENST00000442557 355 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 RNU7-59P-201ENST00000459101 61 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 FCF1P8-201ENST00000510322 597 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 AC022447.1-201ENST00000515358 464 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 RNU6-390P-201ENST00000516259 103 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 NDUFB9P3-201ENST00000521269 501 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AC024909.2-201ENST00000553035 286 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 TGIF1P1-201ENST00000558095 802 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 MIR3146-201ENST00000580367 79 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.83□□□□□ -1.8
USP38Q8NB14 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.83□□□□□ -1.8
USP38Q8NB14 AC006557.5-201ENST00000603126 811 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 AC064807.4-201ENST00000607201 407 ntBASIC3.83□□□□□ -1.8
USP38Q8NB14 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms