Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 SNORD20-201ENST00000384550 80 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AL645733.1-201ENST00000402250 217 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 RPL37P18-201ENST00000411602 243 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 RPL7AP61-201ENST00000443410 636 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 CEACAMP7-201ENST00000444105 496 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 Z95327.1-201ENST00000446082 482 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 snoU13.7-201ENST00000459220 104 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC108161.1-201ENST00000461060 402 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC053481.1-201ENST00000467217 306 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 RPS24P16-201ENST00000497294 392 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC074255.1-201ENST00000511259 501 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 Y_RNA.662-201ENST00000516028 97 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 CPDP1-201ENST00000579660 283 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC068790.4-201ENST00000602474 263 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AL121917.1-203ENST00000605534 577 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC007998.5-201ENST00000622938 237 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 AC005332.5-201ENST00000591222 2919 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 BX322639.1-202ENST00000423987 2213 ntBASIC5.38□□□□□ -1.55
FOXR1Q6PIV2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 LINC02555-201ENST00000563933 1951 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RNU6-371P-201ENST00000364283 108 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RNU6-637P-201ENST00000384050 107 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RNU6-959P-201ENST00000384671 107 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 Y_RNA.581-201ENST00000391017 97 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RN7SKP125-201ENST00000410481 302 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC007738.1-201ENST00000413892 348 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC007098.1-201ENST00000420122 367 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC069213.2-201ENST00000420238 366 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AL160275.3-201ENST00000423876 471 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC073063.1-201ENST00000434352 607 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC008481.1-201ENST00000463278 396 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RPS21P4-201ENST00000487122 248 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 RNU6-27P-201ENST00000516146 107 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC092470.1-201ENST00000546187 132 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC093023.1-201ENST00000547375 507 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC012616.1-201ENST00000600294 197 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 Z83818.1-201ENST00000603584 150 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AC072026.1-201ENST00000605023 201 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 FP236240.3-201ENST00000623061 327 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 U6.92-201ENST00000636464 89 ntBASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
FOXR1Q6PIV2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 Y_RNA.27-201ENST00000362540 103 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNU6-1020P-201ENST00000363684 107 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNA5SP30-201ENST00000365552 115 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 Y_RNA.439-201ENST00000384119 94 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 AL080315.1-201ENST00000406055 466 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNA5SP296-201ENST00000410523 111 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNA5SP494-201ENST00000410653 129 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RNU6-651P-201ENST00000411040 105 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RPL21P90-201ENST00000415692 466 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 AL445433.1-201ENST00000457507 257 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 RN7SL222P-201ENST00000476452 299 ntBASIC5.36□□□□□ -1.55
FOXR1Q6PIV2 VN1R105P-201ENST00000486595 910 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms