Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF43Q68DV7 AL049555.1-201ENST00000562834 1933 ntBASIC5.05□□□□□ -1.6
RNF43Q68DV7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.05□□□□□ -1.6
RNF43Q68DV7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC133552.1-201ENST00000569988 4007 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC103710.2-202ENST00000641454 2853 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU6-280P-201ENST00000364145 104 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 Y_RNA.399-201ENST00000383955 105 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 Y_RNA.539-201ENST00000384635 107 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 Y_RNA.551-201ENST00000384661 102 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU6-387P-201ENST00000411331 105 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RPL12P34-201ENST00000424532 479 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC097713.2-201ENST00000430199 356 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AL158071.1-201ENST00000430315 461 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 FTLP19-201ENST00000433300 394 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RPL21P112-201ENST00000434403 463 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC104073.1-201ENST00000451988 151 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 MTCO3P8-201ENST00000453691 755 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU7-167P-201ENST00000459160 62 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC093852.1-201ENST00000503587 266 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU6-255P-201ENST00000516957 105 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU6-685P-201ENST00000517088 95 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RNU6-64P-201ENST00000517119 105 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 RANP3-201ENST00000530970 276 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 AL133271.1-201ENST00000538229 291 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 AL590392.1-201ENST00000604960 446 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC009570.1-201ENST00000609599 745 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AL138825.1-201ENST00000618587 192 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RNF43Q68DV7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF43Q68DV7 AC008669.1-201ENST00000565823 2178 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 AL359854.1-201ENST00000614203 1594 ntBASIC5.04□□□□□ -1.6
RNF43Q68DV7 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 SNORA73.1-201ENST00000363107 205 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 RNU6-960P-201ENST00000364056 120 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 Y_RNA.274-201ENST00000364714 101 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 Y_RNA.297-201ENST00000364950 91 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 SNORA23-201ENST00000365128 182 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AL357515.1-201ENST00000402967 542 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AL358176.3-201ENST00000420757 454 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 MRPL48P1-201ENST00000445390 636 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AL139109.1-201ENST00000455491 297 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AP000942.1-201ENST00000463969 747 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AC087884.1-201ENST00000469738 328 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 TRBVB-201ENST00000477100 408 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 RNU6-397P-201ENST00000516226 104 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 Y_RNA.703-201ENST00000516846 111 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 RNU6-1092P-201ENST00000516955 87 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 AC090517.1-201ENST00000569307 266 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 MIR4277-201ENST00000578298 84 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 MIR548AI-201ENST00000579940 88 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 AC127459.3-201ENST00000624328 466 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 CR392039.4-201ENST00000624968 501 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 MIR6830-201ENST00000636015 70 ntBASIC5.03□□□□□ -1.6
RNF43Q68DV7 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF43Q68DV7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RNF43Q68DV7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF43Q68DV7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RNF43Q68DV7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms