Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC066616.2-201ENST00000559334 1481 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.11-201ENST00000362375 109 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 SNORA62.1-201ENST00000364287 154 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.279-201ENST00000364763 95 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 RNU6-996P-201ENST00000365438 107 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 MTND1P9-201ENST00000453775 944 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC007967.1-201ENST00000455422 1159 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 RPS29P15-201ENST00000458329 171 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AL133162.1-201ENST00000463228 453 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC135721.1-201ENST00000497954 479 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 EIF4EP3-201ENST00000498782 656 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 MTND3P22-201ENST00000510932 243 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 SNORA70.14-201ENST00000516205 110 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 RNU7-51P-201ENST00000516560 62 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 RNU6-352P-201ENST00000516908 107 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 RNU6-64P-201ENST00000517119 105 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 SUMO2P20-201ENST00000520803 283 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 FAM60DP-201ENST00000524174 632 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AP003072.2-201ENST00000527756 676 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC103843.2-201ENST00000530523 682 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 CBX3P7-201ENST00000532876 502 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AL356055.1-201ENST00000602528 446 ntBASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC178Q5BJE1 AC006020.1-201ENST00000420179 1854 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC092326.2-201ENST00000624772 1561 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.22-201ENST00000362492 102 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL590704.1-201ENST00000402856 794 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL354719.1-201ENST00000406535 843 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RNU6ATAC-201ENST00000408749 126 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RNU2-36P-201ENST00000410361 191 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RNA5SP118-201ENST00000410385 109 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RNA5SP107-201ENST00000411358 122 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 CYCSP19-201ENST00000411715 316 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RPL23AP33-201ENST00000442301 452 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL590399.6-201ENST00000446396 307 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AMD1P1-201ENST00000457220 922 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 HMGB1P25-201ENST00000468402 607 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RPL39P36-201ENST00000490784 156 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TMEM248P1-201ENST00000510579 951 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC010486.1-201ENST00000511793 424 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC022695.1-201ENST00000522089 237 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 ARL2BPP2-201ENST00000550907 489 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL117336.2-201ENST00000602435 335 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AP001429.1-201ENST00000602568 530 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 SNORA62.6-201ENST00000606322 83 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AL359697.1-201ENST00000624879 587 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 AC138649.5-201ENST00000637456 137 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 RIOK3P1-201ENST00000418778 1528 ntBASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CCDC178Q5BJE1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 FAM35DP-201ENST00000323387 2712 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 RPL7P26-201ENST00000333817 754 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.255-201ENST00000364581 97 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms