Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 RNU6-333P-201ENST00000459117 107 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC116533.1-201ENST00000459748 321 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 HMGN2P26-201ENST00000463169 339 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AL049874.1-201ENST00000489560 388 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AL592156.1-201ENST00000508758 304 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 RNA5SP154-201ENST00000516193 111 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC023050.3-201ENST00000541142 333 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC078814.3-201ENST00000553036 491 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC007424.1-203ENST00000554613 687 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AL121576.1-201ENST00000556055 276 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC022655.2-201ENST00000577280 318 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 MIR3921-201ENST00000577308 85 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 MIR4277-201ENST00000578298 84 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 FGF7P1-201ENST00000582820 288 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 uc_338.34-201ENST00000617467 174 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
ATP13A4Q4VNC1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL133383.2-201ENST00000622958 2336 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC126755.2-208ENST00000327792 462 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC007685.1-201ENST00000329806 452 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC138969.1-213ENST00000331436 462 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MIR514A1-201ENST00000385133 98 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RNU6-817P-201ENST00000391083 104 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 LAP3P1-201ENST00000403648 294 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RAB28P1-201ENST00000411517 641 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL513331.1-201ENST00000411908 397 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 VDAC1P3-201ENST00000434069 851 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 ELOCP23-201ENST00000452014 332 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MTND1P11-201ENST00000456661 876 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RNU6-953P-201ENST00000459154 107 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RNU6-123P-201ENST00000516163 102 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 SNORA31.8-201ENST00000516327 108 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 Y_RNA.689-201ENST00000516589 107 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RNA5SP309-201ENST00000516670 106 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MTND4P7-201ENST00000523876 130 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC009643.1-201ENST00000532030 391 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL137161.1-201ENST00000532231 390 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC022968.1-201ENST00000567372 442 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RPL23AP87-202ENST00000573039 466 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC069234.5-201ENST00000611056 416 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL390240.1-201ENST00000612950 384 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL359547.2-201ENST00000615810 418 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MIR7702-201ENST00000621931 59 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AL357559.1-201ENST00000622228 274 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC090617.10-201ENST00000624308 134 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MTND5P42-201ENST00000637720 498 ntBASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ATP13A4Q4VNC1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 SNORD74.4-201ENST00000364129 80 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 RPL23AP48-201ENST00000406913 488 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 RNU2-37P-201ENST00000410695 177 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 RNA5SP306-201ENST00000411087 107 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 EEF1A1P40-201ENST00000412883 573 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 HMGB1P27-201ENST00000431429 603 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 KCTD9P3-201ENST00000434597 1169 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 TXNP1-201ENST00000441872 371 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC006011.1-201ENST00000442758 349 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 NARSP2-201ENST00000518524 679 ntBASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.31□□□□□ -1.72
ATP13A4Q4VNC1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms