Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 HMGB1P5-201ENST00000255320 642 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC5Q00444 MIR1290-201ENST00000408735 78 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC5Q00444 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC5Q00444 MTND2P30-201ENST00000456663 382 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 RNU7-23P-201ENST00000459465 62 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC128713.1-201ENST00000471495 306 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 SUMO2P6-201ENST00000505273 288 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.88□□□□□ -2.11
HOXC5Q00444 AC113155.1-201ENST00000511141 769 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 RNU6-1256P-201ENST00000516539 103 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 ATP5F1P5-201ENST00000526403 760 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.88□□□□□ -2.11
HOXC5Q00444 AL512310.1-201ENST00000548639 172 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.88□□□□□ -2.11
HOXC5Q00444 MTCYBP27-201ENST00000555160 670 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC5Q00444 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC009314.1-201ENST00000603871 304 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC103710.4-201ENST00000609301 899 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 OR10AB1P-201ENST00000609613 938 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 HMGB1P24-202ENST00000615653 685 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AC011330.2-201ENST00000621680 635 ntBASIC1.88□□□□□ -2.11
HOXC5Q00444 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXC5Q00444 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HOXC5Q00444 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC5Q00444 OR4G2P-202ENST00000641004 1759 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 RNU6-932P-201ENST00000391108 106 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 U3.40-201ENST00000408706 208 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AL513331.1-201ENST00000411908 397 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 Z85995.1-201ENST00000415547 335 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 Z98742.3-201ENST00000418637 326 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXC5Q00444 AC019178.2-201ENST00000423595 505 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AL358075.3-201ENST00000426289 226 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 RSL24D1P8-201ENST00000434442 492 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 UBE2V1P13-201ENST00000436983 439 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXC5Q00444 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXC5Q00444 FAM172BP-201ENST00000487497 1089 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.87□□□□□ -2.11
HOXC5Q00444 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 IGKV3-31-201ENST00000523109 329 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXC5Q00444 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXC5Q00444 RPS15AP11-201ENST00000594193 385 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AL450472.3-201ENST00000615578 367 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AL356266.1-201ENST00000623311 483 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 AC026634.1-201ENST00000634369 198 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 U6.101-201ENST00000637707 76 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 MIR7515-201ENST00000637837 67 ntBASIC1.87□□□□□ -2.11
HOXC5Q00444 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
HOXC5Q00444 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXC5Q00444 MTND4P35-201ENST00000604257 1375 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
HOXC5Q00444 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HOXC5Q00444 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
HOXC5Q00444 SNORA68.1-201ENST00000364537 132 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 NPM1P10-201ENST00000398310 865 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 RPL17P12-201ENST00000413391 526 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 SPA17P1-201ENST00000416656 452 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC5Q00444 Z93242.1-201ENST00000427102 353 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 MTCYBP32-201ENST00000427945 1084 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC5Q00444 LARP1BP2-201ENST00000486594 519 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 OR4G11P-201ENST00000492842 939 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC104090.1-201ENST00000506341 1171 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC069306.1-201ENST00000507006 843 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC5Q00444 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AP003066.2-201ENST00000529375 555 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC009063.1-201ENST00000563342 702 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.86□□□□□ -2.11
HOXC5Q00444 AC005498.1-201ENST00000592125 465 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 DUXAP11-201ENST00000603858 526 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AC091946.2-201ENST00000606105 291 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 AP001521.1-201ENST00000609150 300 ntBASIC1.86□□□□□ -2.11
HOXC5Q00444 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.86□□□□□ -2.11
HOXC5Q00444 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC5Q00444 RNU6-492P-201ENST00000363035 104 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 MIR217-201ENST00000384817 110 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC5Q00444 RNA5SP80-201ENST00000410475 111 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 RNU4-72P-201ENST00000410754 173 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 RPS7P9-201ENST00000414704 586 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms