Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PRAMEP78395 AL161912.2-201ENST00000565707 3007 ntBASIC3.41□□□□□ -1.86
PRAMEP78395 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PRAMEP78395 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PRAMEP78395 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRAMEP78395 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PRAMEP78395 RNU4-35P-201ENST00000362588 141 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 Y_RNA.77-201ENST00000362962 107 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 RNU6-297P-201ENST00000384636 107 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AL356967.1-201ENST00000406305 431 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRAMEP78395 RN7SKP111-201ENST00000410349 271 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 RPS29P4-201ENST00000414733 161 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 BTF3L4P3-201ENST00000418879 476 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 SEPT2P1-201ENST00000419651 180 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC006366.1-201ENST00000422002 759 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.4□□□□□ -1.87
PRAMEP78395 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.4□□□□□ -1.87
PRAMEP78395 PGBD4P3-201ENST00000440731 581 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 MTND6P13-201ENST00000443510 523 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 CBWD4P-201ENST00000445695 655 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AL360221.1-201ENST00000445989 335 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.4□□□□□ -1.87
PRAMEP78395 RNU6-956P-201ENST00000458868 103 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC006445.2-201ENST00000510061 472 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 RNA5SP337-201ENST00000517007 109 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC026403.1-201ENST00000518938 295 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.4□□□□□ -1.87
PRAMEP78395 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.4□□□□□ -1.87
PRAMEP78395 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.4□□□□□ -1.87
PRAMEP78395 ARL2BPP2-201ENST00000550907 489 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.4□□□□□ -1.87
PRAMEP78395 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.4□□□□□ -1.87
PRAMEP78395 AC005771.1-201ENST00000585581 349 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC067852.3-201ENST00000589177 561 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
PRAMEP78395 AC108479.2-201ENST00000617314 601 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 MIR6076-201ENST00000617521 113 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
PRAMEP78395 AC110994.2-201ENST00000635481 492 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.87
PRAMEP78395 AC118273.1-201ENST00000525324 3006 ntBASIC3.4□□□□□ -1.87
PRAMEP78395 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRAMEP78395 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.39□□□□□ -1.87
PRAMEP78395 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PRAMEP78395 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 GNG5P1-201ENST00000255500 204 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNU1-75P-201ENST00000347264 129 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNU5E-1-201ENST00000362477 120 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNA5SP197-201ENST00000363357 119 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNU4-91P-201ENST00000364778 135 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 SNORD17-201ENST00000390930 237 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.39□□□□□ -1.87
PRAMEP78395 RNU2-36P-201ENST00000410361 191 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNA5SP38-201ENST00000410750 119 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RNU6-195P-201ENST00000411352 109 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AL513331.1-201ENST00000411908 397 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.39□□□□□ -1.87
PRAMEP78395 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.39□□□□□ -1.87
PRAMEP78395 PIGFP3-201ENST00000441918 722 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 USP9YP15-201ENST00000442391 422 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 USP9YP29-201ENST00000445112 563 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC016696.1-201ENST00000446949 318 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AL590664.1-201ENST00000448065 339 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RBMY2UP-201ENST00000453474 324 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 snoU109.1-201ENST00000459339 135 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 HMGN2P13-201ENST00000476476 274 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 RPL30P5-201ENST00000494923 336 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 AC100870.1-201ENST00000522035 505 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.39□□□□□ -1.87
PRAMEP78395 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.39□□□□□ -1.87
PRAMEP78395 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.39□□□□□ -1.87
PRAMEP78395 HSPE1P7-201ENST00000604681 321 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC103710.2-201ENST00000609912 942 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC004908.3-201ENST00000610248 625 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC091304.9-201ENST00000612091 226 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC006111.3-201ENST00000622137 383 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 AC012442.3-202ENST00000636742 206 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 AC004972.1-201ENST00000623934 2209 ntBASIC3.39□□□□□ -1.87
PRAMEP78395 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
PRAMEP78395 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRAMEP78395 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRAMEP78395 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms