Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPL39P62891 RNU6-356P-201ENST00000384140 107 ntBASIC0.6□□□□□ -2.31
RPL39P62891 SNORD26-201ENST00000384147 75 ntBASIC0.6□□□□□ -2.31
RPL39P62891 SNORA11.2-201ENST00000408318 127 ntBASIC0.6□□□□□ -2.31
RPL39P62891 RNU6-920P-201ENST00000410926 92 ntBASIC0.6□□□□□ -2.31
RPL39P62891 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL39P62891 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL39P62891 RPL21P66-201ENST00000426566 466 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AC010095.1-201ENST00000443543 144 ntBASIC0.6□□□□□ -2.31
RPL39P62891 RPS27P1-201ENST00000450552 247 ntBASIC0.6□□□□□ -2.31
RPL39P62891 RPL12P25-201ENST00000455592 494 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AP002345.1-201ENST00000456493 928 ntBASIC0.6□□□□□ -2.31
RPL39P62891 SNORA59A-201ENST00000459326 152 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AC146507.1-201ENST00000468335 354 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AC021382.1-201ENST00000483523 359 ntBASIC0.6□□□□□ -2.31
RPL39P62891 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL39P62891 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL39P62891 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.6□□□□□ -2.31
RPL39P62891 NPM1P52-201ENST00000518264 846 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AC022690.1-201ENST00000526681 550 ntBASIC0.6□□□□□ -2.31
RPL39P62891 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL39P62891 GNAI2P1-201ENST00000541815 315 ntBASIC0.6□□□□□ -2.31
RPL39P62891 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL39P62891 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.6□□□□□ -2.31
RPL39P62891 FAM60BP-201ENST00000578364 658 ntBASIC0.6□□□□□ -2.31
RPL39P62891 SNORD39.2-201ENST00000579995 76 ntBASIC0.6□□□□□ -2.31
RPL39P62891 MIR3117-201ENST00000584034 78 ntBASIC0.6□□□□□ -2.31
RPL39P62891 BNIP3P7-201ENST00000605641 516 ntBASIC0.6□□□□□ -2.31
RPL39P62891 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPL39P62891 AL137003.2-201ENST00000606924 2538 ntBASIC0.6□□□□□ -2.31
RPL39P62891 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.59□□□□□ -2.31
RPL39P62891 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RPL39P62891 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
RPL39P62891 MIR26B-201ENST00000362251 77 ntBASIC0.59□□□□□ -2.31
RPL39P62891 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
RPL39P62891 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.59□□□□□ -2.31
RPL39P62891 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
RPL39P62891 OR6C72P-201ENST00000451403 892 ntBASIC0.59□□□□□ -2.31
RPL39P62891 RNU6-1218P-201ENST00000458990 108 ntBASIC0.59□□□□□ -2.31
RPL39P62891 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC103851.1-201ENST00000506833 274 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC008834.1-201ENST00000511612 175 ntBASIC0.59□□□□□ -2.31
RPL39P62891 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.59□□□□□ -2.31
RPL39P62891 RNA5SP468-201ENST00000516782 93 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL39P62891 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL39P62891 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL39P62891 AP005136.1-201ENST00000579765 429 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC009977.1-201ENST00000586015 570 ntBASIC0.59□□□□□ -2.31
RPL39P62891 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC0.59□□□□□ -2.31
RPL39P62891 AC098826.3-201ENST00000603823 466 ntBASIC0.59□□□□□ -2.31
RPL39P62891 BNIP3P4-201ENST00000604946 565 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.59□□□□□ -2.31
RPL39P62891 AL136313.1-201ENST00000624804 202 ntBASIC0.59□□□□□ -2.31
RPL39P62891 AC110079.1-202ENST00000635213 138 ntBASIC0.59□□□□□ -2.31
RPL39P62891 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.58□□□□□ -2.32
RPL39P62891 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 RNU6-1159P-201ENST00000362933 107 ntBASIC0.58□□□□□ -2.32
RPL39P62891 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 MIR146A-201ENST00000385201 99 ntBASIC0.58□□□□□ -2.32
RPL39P62891 RNA5SP465-201ENST00000391195 109 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AL035405.1-201ENST00000400795 710 ntBASIC0.58□□□□□ -2.32
RPL39P62891 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.58□□□□□ -2.32
RPL39P62891 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.58□□□□□ -2.32
RPL39P62891 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC0.58□□□□□ -2.32
RPL39P62891 AC008850.1-201ENST00000427546 362 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.58□□□□□ -2.32
RPL39P62891 AP001960.1-201ENST00000506494 658 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC008885.2-201ENST00000509506 930 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC019227.1-201ENST00000526902 510 ntBASIC0.58□□□□□ -2.32
RPL39P62891 OR5AL2P-201ENST00000532185 920 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.58□□□□□ -2.32
RPL39P62891 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.58□□□□□ -2.32
RPL39P62891 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.58□□□□□ -2.32
RPL39P62891 SNRPGP15-201ENST00000600149 222 ntBASIC0.58□□□□□ -2.32
RPL39P62891 FAM71BP1-201ENST00000604431 523 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC080078.3-201ENST00000605407 463 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC123912.5-201ENST00000605470 343 ntBASIC0.58□□□□□ -2.32
RPL39P62891 ZNF33CP-201ENST00000432492 2030 ntBASIC0.58□□□□□ -2.32
RPL39P62891 AC131280.1-202ENST00000624067 4211 ntBASIC0.58□□□□□ -2.32
RPL39P62891 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RPL39P62891 AC111188.2-201ENST00000529697 1387 ntBASIC0.57□□□□□ -2.32
RPL39P62891 RNU1-72P-201ENST00000362976 153 ntBASIC0.57□□□□□ -2.32
RPL39P62891 RNU6-304P-201ENST00000364855 107 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL39P62891 AC004965.1-201ENST00000413033 213 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL39P62891 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.57□□□□□ -2.32
RPL39P62891 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.57□□□□□ -2.32
RPL39P62891 AL591806.2-201ENST00000433122 173 ntBASIC0.57□□□□□ -2.32
RPL39P62891 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC0.57□□□□□ -2.32
RPL39P62891 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC0.57□□□□□ -2.32
RPL39P62891 AC114801.2-201ENST00000503825 781 ntBASIC0.57□□□□□ -2.32
RPL39P62891 RNU6-351P-201ENST00000516097 100 ntBASIC0.57□□□□□ -2.32
RPL39P62891 SNORA31.25-201ENST00000517242 134 ntBASIC0.57□□□□□ -2.32
RPL39P62891 MTCYBP41-201ENST00000528913 1123 ntBASIC0.57□□□□□ -2.32
RPL39P62891 TRAV11-201ENST00000539512 339 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms