Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.84□□□□□ -1.63
RTP1P59025 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RTP1P59025 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.84□□□□□ -1.63
RTP1P59025 7SK.7-201ENST00000603504 247 ntBASIC4.84□□□□□ -1.63
RTP1P59025 AC090425.1-201ENST00000610007 140 ntBASIC4.84□□□□□ -1.63
RTP1P59025 AL590099.1-201ENST00000615276 138 ntBASIC4.84□□□□□ -1.63
RTP1P59025 uc_338.11-201ENST00000619132 160 ntBASIC4.84□□□□□ -1.63
RTP1P59025 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RTP1P59025 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.84□□□□□ -1.63
RTP1P59025 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.84□□□□□ -1.63
RTP1P59025 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTP1P59025 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTP1P59025 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTP1P59025 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.84□□□□□ -1.64
RTP1P59025 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RTP1P59025 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
RTP1P59025 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP1P59025 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.83□□□□□ -1.64
RTP1P59025 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 RNU6-179P-201ENST00000363350 107 ntBASIC4.83□□□□□ -1.64
RTP1P59025 SNORD113-7-201ENST00000363762 77 ntBASIC4.83□□□□□ -1.64
RTP1P59025 RNA5SP22-201ENST00000365393 109 ntBASIC4.83□□□□□ -1.64
RTP1P59025 SNORA68.2-201ENST00000391263 128 ntBASIC4.83□□□□□ -1.64
RTP1P59025 CISD1P1-201ENST00000393907 327 ntBASIC4.83□□□□□ -1.64
RTP1P59025 RNU2-21P-201ENST00000410368 188 ntBASIC4.83□□□□□ -1.64
RTP1P59025 RNU2-15P-201ENST00000410692 191 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP1P59025 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP1P59025 AC005019.1-201ENST00000436455 431 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AC127537.2-201ENST00000439258 465 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.83□□□□□ -1.64
RTP1P59025 MTCO3P10-201ENST00000455912 772 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.83□□□□□ -1.64
RTP1P59025 Y_RNA.653-201ENST00000459091 95 ntBASIC4.83□□□□□ -1.64
RTP1P59025 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.83□□□□□ -1.64
RTP1P59025 RNA5SP519-201ENST00000516480 119 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AC090136.1-201ENST00000520009 240 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP1P59025 AP003122.3-201ENST00000526316 255 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.83□□□□□ -1.64
RTP1P59025 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP1P59025 AC024619.4-201ENST00000580924 316 ntBASIC4.83□□□□□ -1.64
RTP1P59025 MIR3672-201ENST00000584290 82 ntBASIC4.83□□□□□ -1.64
RTP1P59025 MIR3149-201ENST00000584629 83 ntBASIC4.83□□□□□ -1.64
RTP1P59025 MIR6864-201ENST00000617935 70 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AL136313.1-201ENST00000624804 202 ntBASIC4.83□□□□□ -1.64
RTP1P59025 U6.114-201ENST00000636407 96 ntBASIC4.83□□□□□ -1.64
RTP1P59025 AC012442.3-202ENST00000636742 206 ntBASIC4.83□□□□□ -1.64
RTP1P59025 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP1P59025 AL451142.2-201ENST00000429076 2090 ntBASIC4.83□□□□□ -1.64
RTP1P59025 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTP1P59025 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
RTP1P59025 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RTP1P59025 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.83□□□□□ -1.64
RTP1P59025 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RTP1P59025 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP1P59025 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 RNU1-20P-201ENST00000363314 162 ntBASIC4.82□□□□□ -1.64
RTP1P59025 Y_RNA.148-201ENST00000363557 117 ntBASIC4.82□□□□□ -1.64
RTP1P59025 SNORD115-7-201ENST00000365306 82 ntBASIC4.82□□□□□ -1.64
RTP1P59025 RNU2-36P-201ENST00000410361 191 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC108032.1-201ENST00000416706 207 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC099336.2-201ENST00000422457 254 ntBASIC4.82□□□□□ -1.64
RTP1P59025 SKA2P1-201ENST00000425592 390 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.82□□□□□ -1.64
RTP1P59025 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 AC016696.1-201ENST00000446949 318 ntBASIC4.82□□□□□ -1.64
RTP1P59025 RPL30P15-201ENST00000457129 321 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC099560.2-201ENST00000457554 255 ntBASIC4.82□□□□□ -1.64
RTP1P59025 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 DEFB109D-201ENST00000529497 240 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AL137161.1-201ENST00000532231 390 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.82□□□□□ -1.64
RTP1P59025 AL133153.1-201ENST00000557756 303 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC004817.2-201ENST00000561794 651 ntBASIC4.82□□□□□ -1.64
RTP1P59025 MIR5690-201ENST00000583739 73 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 NF1P5-201ENST00000588287 448 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AF038458.1-201ENST00000588406 262 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AC104662.1-201ENST00000604448 511 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AL160290.3-201ENST00000604869 165 ntBASIC4.82□□□□□ -1.64
RTP1P59025 AL021997.2-201ENST00000615674 271 ntBASIC4.82□□□□□ -1.64
RTP1P59025 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RTP1P59025 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 AC011978.2-201ENST00000569835 2054 ntBASIC4.82□□□□□ -1.64
RTP1P59025 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTP1P59025 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.82□□□□□ -1.64
RTP1P59025 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.82□□□□□ -1.64
RTP1P59025 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTP1P59025 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.81□□□□□ -1.64
RTP1P59025 MTND5P19-201ENST00000424872 1794 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms