Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 RN7SKP202-201ENST00000410439 330 ntBASIC4.09□□□□□ -1.75
PER3P56645 RNU6-387P-201ENST00000411331 105 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.09□□□□□ -1.75
PER3P56645 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.09□□□□□ -1.75
PER3P56645 AC006946.1-201ENST00000429106 328 ntBASIC4.09□□□□□ -1.75
PER3P56645 AL365400.1-201ENST00000431854 640 ntBASIC4.09□□□□□ -1.75
PER3P56645 RPL21P112-201ENST00000434403 463 ntBASIC4.09□□□□□ -1.75
PER3P56645 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.09□□□□□ -1.75
PER3P56645 AC024082.2-201ENST00000434771 238 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.09□□□□□ -1.75
PER3P56645 RPL23AP93-201ENST00000440847 484 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.09□□□□□ -1.75
PER3P56645 AL645939.1-201ENST00000453429 797 ntBASIC4.09□□□□□ -1.75
PER3P56645 S100A11P1-201ENST00000477525 312 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC091167.1-201ENST00000492017 396 ntBASIC4.09□□□□□ -1.75
PER3P56645 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.09□□□□□ -1.75
PER3P56645 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.09□□□□□ -1.75
PER3P56645 RNU6-277P-201ENST00000516272 106 ntBASIC4.09□□□□□ -1.75
PER3P56645 Y_RNA.675-201ENST00000516389 149 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.09□□□□□ -1.75
PER3P56645 MTND4P7-201ENST00000523876 130 ntBASIC4.09□□□□□ -1.75
PER3P56645 AP003730.1-201ENST00000524605 285 ntBASIC4.09□□□□□ -1.75
PER3P56645 AP004371.1-201ENST00000525240 214 ntBASIC4.09□□□□□ -1.75
PER3P56645 AL137161.1-201ENST00000532231 390 ntBASIC4.09□□□□□ -1.75
PER3P56645 HPRT1P3-201ENST00000539521 576 ntBASIC4.09□□□□□ -1.75
PER3P56645 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.09□□□□□ -1.75
PER3P56645 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.09□□□□□ -1.75
PER3P56645 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.09□□□□□ -1.75
PER3P56645 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
PER3P56645 RNU4-89P-201ENST00000607443 133 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC012409.4-201ENST00000612923 249 ntBASIC4.09□□□□□ -1.75
PER3P56645 SDR42E1P2-201ENST00000614861 481 ntBASIC4.09□□□□□ -1.75
PER3P56645 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
PER3P56645 AC007998.5-201ENST00000622938 237 ntBASIC4.09□□□□□ -1.75
PER3P56645 MIR3653-201ENST00000625572 110 ntBASIC4.09□□□□□ -1.75
PER3P56645 TPTEP1-208ENST00000636884 213 ntBASIC4.09□□□□□ -1.75
PER3P56645 MIR492-201ENST00000638676 116 ntBASIC4.09□□□□□ -1.75
PER3P56645 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PER3P56645 MTND4P14-201ENST00000435799 1354 ntBASIC4.09□□□□□ -1.75
PER3P56645 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PER3P56645 TPTE2P4-201ENST00000258589 1605 ntBASIC4.09□□□□□ -1.76
PER3P56645 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.09□□□□□ -1.76
PER3P56645 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PER3P56645 AL365440.1-201ENST00000436135 2167 ntBASIC4.09□□□□□ -1.76
PER3P56645 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PER3P56645 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.08□□□□□ -1.76
PER3P56645 RNU4-79P-201ENST00000362764 141 ntBASIC4.08□□□□□ -1.76
PER3P56645 RNA5SP366-201ENST00000365454 123 ntBASIC4.08□□□□□ -1.76
PER3P56645 Y_RNA.373-201ENST00000365600 103 ntBASIC4.08□□□□□ -1.76
PER3P56645 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PER3P56645 AL583835.1-201ENST00000399570 407 ntBASIC4.08□□□□□ -1.76
PER3P56645 KCTD9P3-201ENST00000434597 1169 ntBASIC4.08□□□□□ -1.76
PER3P56645 AL121871.1-201ENST00000443413 436 ntBASIC4.08□□□□□ -1.76
PER3P56645 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 PRPS1P1-201ENST00000445305 876 ntBASIC4.08□□□□□ -1.76
PER3P56645 HMGN2P21-201ENST00000447764 270 ntBASIC4.08□□□□□ -1.76
PER3P56645 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.08□□□□□ -1.76
PER3P56645 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.08□□□□□ -1.76
PER3P56645 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 RNU7-66P-201ENST00000459469 62 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC108022.1-201ENST00000493466 478 ntBASIC4.08□□□□□ -1.76
PER3P56645 RPL23AP55-201ENST00000498163 452 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.08□□□□□ -1.76
PER3P56645 RNU6-123P-201ENST00000516163 102 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PER3P56645 AC011611.1-201ENST00000552179 197 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC026464.5-201ENST00000562497 722 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.08□□□□□ -1.76
PER3P56645 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.08□□□□□ -1.76
PER3P56645 SNRPGP15-201ENST00000600149 222 ntBASIC4.08□□□□□ -1.76
PER3P56645 DPPA3P3-201ENST00000603842 430 ntBASIC4.08□□□□□ -1.76
PER3P56645 CTHRC1P1-201ENST00000605383 469 ntBASIC4.08□□□□□ -1.76
PER3P56645 AC092807.2-201ENST00000609367 243 ntBASIC4.08□□□□□ -1.76
PER3P56645 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PER3P56645 AC093913.1-201ENST00000614178 329 ntBASIC4.08□□□□□ -1.76
PER3P56645 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.08□□□□□ -1.76
PER3P56645 C2orf27A-204ENST00000623058 969 ntBASIC4.08□□□□□ -1.76
PER3P56645 AL133216.2-202ENST00000634512 349 ntBASIC4.08□□□□□ -1.76
PER3P56645 MIR4275-201ENST00000636486 87 ntBASIC4.08□□□□□ -1.76
PER3P56645 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PER3P56645 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PER3P56645 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
PER3P56645 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.07□□□□□ -1.76
PER3P56645 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PER3P56645 AL356489.2-201ENST00000566968 3528 ntBASIC4.07□□□□□ -1.76
PER3P56645 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PER3P56645 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.07□□□□□ -1.76
PER3P56645 AP004289.2-201ENST00000444413 1457 ntBASIC4.07□□□□□ -1.76
PER3P56645 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.07□□□□□ -1.76
PER3P56645 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PER3P56645 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
PER3P56645 AC021146.4-201ENST00000309229 279 ntBASIC4.07□□□□□ -1.76
PER3P56645 MIR383-201ENST00000362257 73 ntBASIC4.07□□□□□ -1.76
PER3P56645 Y_RNA.100-201ENST00000363141 102 ntBASIC4.07□□□□□ -1.76
PER3P56645 RNU6-335P-201ENST00000364563 113 ntBASIC4.07□□□□□ -1.76
PER3P56645 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PER3P56645 RNU4-46P-201ENST00000410818 138 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms