Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC096577.2-201ENST00000611455 153 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC016597.2-201ENST00000613256 341 ntBASIC2.57□□□□□ -2
PKNOX1P55347 SNHG22-203ENST00000617833 660 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC013470.4-201ENST00000619978 986 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL158801.5-201ENST00000623123 465 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AL078595.3-201ENST00000623815 1166 ntBASIC2.57□□□□□ -2
PKNOX1P55347 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.57□□□□□ -2
PKNOX1P55347 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
PKNOX1P55347 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.57□□□□□ -2
PKNOX1P55347 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
PKNOX1P55347 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.56□□□□□ -2
PKNOX1P55347 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
PKNOX1P55347 RNU6-83P-201ENST00000384568 112 ntBASIC2.56□□□□□ -2
PKNOX1P55347 MIR9-1-201ENST00000385198 89 ntBASIC2.56□□□□□ -2
PKNOX1P55347 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.56□□□□□ -2
PKNOX1P55347 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKNOX1P55347 RNU6-757P-201ENST00000410334 100 ntBASIC2.56□□□□□ -2
PKNOX1P55347 PIGPP2-201ENST00000411569 458 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AL356867.1-201ENST00000429623 299 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX1P55347 NANOGNBP1-201ENST00000448444 480 ntBASIC2.56□□□□□ -2
PKNOX1P55347 S100A11P2-201ENST00000467589 312 ntBASIC2.56□□□□□ -2
PKNOX1P55347 LARP1BP2-201ENST00000486594 519 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC091951.3-201ENST00000504093 246 ntBASIC2.56□□□□□ -2
PKNOX1P55347 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX1P55347 AC093281.2-201ENST00000510153 597 ntBASIC2.56□□□□□ -2
PKNOX1P55347 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.56□□□□□ -2
PKNOX1P55347 RNU6-928P-201ENST00000516876 104 ntBASIC2.56□□□□□ -2
PKNOX1P55347 SNORA31.21-201ENST00000517180 77 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX1P55347 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX1P55347 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX1P55347 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKNOX1P55347 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.56□□□□□ -2
PKNOX1P55347 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX1P55347 AC124947.2-202ENST00000552735 133 ntBASIC2.56□□□□□ -2
PKNOX1P55347 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.56□□□□□ -2
PKNOX1P55347 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
PKNOX1P55347 HMGB1P6-201ENST00000569046 646 ntBASIC2.56□□□□□ -2
PKNOX1P55347 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
PKNOX1P55347 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.56□□□□□ -2
PKNOX1P55347 RPL12P50-201ENST00000603116 116 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AL592221.1-201ENST00000605266 382 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC103710.4-201ENST00000609301 899 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC097478.2-201ENST00000610572 514 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AL136981.2-201ENST00000617319 734 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC004777.1-201ENST00000624317 287 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC068880.5-201ENST00000624331 290 ntBASIC2.56□□□□□ -2
PKNOX1P55347 OR5H6-203ENST00000642105 978 ntBASIC2.56□□□□□ -2
PKNOX1P55347 AC073346.2-201ENST00000624724 2058 ntBASIC2.56□□□□□ -2
PKNOX1P55347 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.56□□□□□ -2
PKNOX1P55347 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PKNOX1P55347 AL672167.1-206ENST00000356293 943 ntBASIC2.55□□□□□ -2
PKNOX1P55347 RNU1-112P-201ENST00000364401 164 ntBASIC2.55□□□□□ -2
PKNOX1P55347 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PKNOX1P55347 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.55□□□□□ -2
PKNOX1P55347 RNU1-39P-201ENST00000383897 165 ntBASIC2.55□□□□□ -2
PKNOX1P55347 SNORA44-201ENST00000384584 132 ntBASIC2.55□□□□□ -2
PKNOX1P55347 MIR23B-201ENST00000384832 97 ntBASIC2.55□□□□□ -2
PKNOX1P55347 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.55□□□□□ -2
PKNOX1P55347 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
PKNOX1P55347 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX1P55347 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX1P55347 AC008850.1-201ENST00000427546 362 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX1P55347 RSU1P2-202ENST00000437884 485 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AL135938.1-201ENST00000443141 297 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AP000542.1-201ENST00000448473 371 ntBASIC2.55□□□□□ -2
PKNOX1P55347 MTND1P9-201ENST00000453775 944 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC027673.1-201ENST00000456245 405 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 ATG12P2-201ENST00000456830 416 ntBASIC2.55□□□□□ -2
PKNOX1P55347 RNU6-420P-201ENST00000458780 107 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 AC133134.1-201ENST00000466800 359 ntBASIC2.55□□□□□ -2
PKNOX1P55347 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.55□□□□□ -2
PKNOX1P55347 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 AC026427.2-201ENST00000506228 536 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC108043.1-201ENST00000512696 574 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC034159.1-201ENST00000513885 583 ntBASIC2.55□□□□□ -2
PKNOX1P55347 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.55□□□□□ -2
PKNOX1P55347 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.55□□□□□ -2
PKNOX1P55347 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 AC060766.3-201ENST00000591442 263 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC007349.4-201ENST00000608114 532 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AC092106.3-201ENST00000611308 722 ntBASIC2.55□□□□□ -2
PKNOX1P55347 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AP001002.2-201ENST00000625137 386 ntBASIC2.55□□□□□ -2
PKNOX1P55347 AL159972.1-201ENST00000625150 448 ntBASIC2.55□□□□□ -2
PKNOX1P55347 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
PKNOX1P55347 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.55□□□□□ -2
PKNOX1P55347 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms