Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 RABEPKP1-201ENST00000440529 1026 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 MTND6P13-201ENST00000443510 523 ntBASIC3.2□□□□□ -1.9
PDX1P52945 RPL17P49-201ENST00000443728 411 ntBASIC3.2□□□□□ -1.9
PDX1P52945 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 TPT1P7-201ENST00000458300 517 ntBASIC3.2□□□□□ -1.9
PDX1P52945 SNORD42A-201ENST00000459584 64 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AP001086.1-201ENST00000494882 321 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC114967.1-201ENST00000504890 259 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 MTCO3P7-201ENST00000510008 774 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC079140.3-201ENST00000511111 550 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.2□□□□□ -1.9
PDX1P52945 MTCYBP33-201ENST00000575007 1130 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.2□□□□□ -1.9
PDX1P52945 MIR3118-1-201ENST00000581787 76 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC005771.1-201ENST00000585581 349 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.2□□□□□ -1.9
PDX1P52945 AC073657.2-201ENST00000605661 303 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC098614.4-201ENST00000607601 462 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AC103710.3-201ENST00000608157 948 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AL592295.2-201ENST00000612578 206 ntBASIC3.2□□□□□ -1.9
PDX1P52945 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 AC095031.1-201ENST00000623685 672 ntBASIC3.2□□□□□ -1.9
PDX1P52945 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.2□□□□□ -1.9
PDX1P52945 AC019226.1-201ENST00000625666 515 ntBASIC3.2□□□□□ -1.9
PDX1P52945 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
PDX1P52945 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDX1P52945 RIOK3P1-201ENST00000418778 1528 ntBASIC3.19□□□□□ -1.9
PDX1P52945 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
PDX1P52945 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PDX1P52945 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PDX1P52945 RNU6-173P-201ENST00000364215 104 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU4-75P-201ENST00000364621 146 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AP002088.1-201ENST00000382740 395 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU6-76P-201ENST00000384060 104 ntBASIC3.19□□□□□ -1.9
PDX1P52945 Y_RNA.510-201ENST00000384511 114 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU6-754P-201ENST00000391166 107 ntBASIC3.19□□□□□ -1.9
PDX1P52945 DEFB108C-201ENST00000400154 252 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU4-65P-201ENST00000410473 140 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU2-37P-201ENST00000410695 177 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU4-47P-201ENST00000410876 114 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU6-55P-201ENST00000411092 107 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RNU6-954P-201ENST00000411355 107 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RPS3AP3-201ENST00000411933 242 ntBASIC3.19□□□□□ -1.9
PDX1P52945 MTND1P21-201ENST00000412991 285 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AL353678.1-201ENST00000422735 741 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.19□□□□□ -1.9
PDX1P52945 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 AC236972.1-201ENST00000433225 199 ntBASIC3.19□□□□□ -1.9
PDX1P52945 TIMM9P1-201ENST00000436122 256 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 AL162389.1-201ENST00000449233 177 ntBASIC3.19□□□□□ -1.9
PDX1P52945 SSXP1-201ENST00000453640 473 ntBASIC3.19□□□□□ -1.9
PDX1P52945 SNRPFP4-201ENST00000456366 242 ntBASIC3.19□□□□□ -1.9
PDX1P52945 HMGN2P16-201ENST00000456802 261 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RPS4XP2-201ENST00000458402 793 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RPL23AP62-201ENST00000463396 453 ntBASIC3.19□□□□□ -1.9
PDX1P52945 RPL23AP41-201ENST00000484754 458 ntBASIC3.19□□□□□ -1.9
PDX1P52945 MTND1P3-201ENST00000484956 952 ntBASIC3.19□□□□□ -1.9
PDX1P52945 ARL2BPP4-201ENST00000506854 471 ntBASIC3.19□□□□□ -1.9
PDX1P52945 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDX1P52945 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 RN7SKP60-201ENST00000516985 239 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 AC005951.2-201ENST00000576282 495 ntBASIC3.19□□□□□ -1.9
PDX1P52945 MIR3146-201ENST00000580367 79 ntBASIC3.19□□□□□ -1.9
PDX1P52945 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.19□□□□□ -1.9
PDX1P52945 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
PDX1P52945 BDH2P1-201ENST00000602288 736 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AL359999.1-201ENST00000604513 294 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AC004908.2-201ENST00000609090 574 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AC004696.1-201ENST00000614345 607 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AL162274.2-201ENST00000614406 332 ntBASIC3.19□□□□□ -1.9
PDX1P52945 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.19□□□□□ -1.9
PDX1P52945 AL136313.1-201ENST00000624804 202 ntBASIC3.19□□□□□ -1.9
PDX1P52945 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDX1P52945 ZNF807-201ENST00000328088 1707 ntBASIC3.19□□□□□ -1.9
PDX1P52945 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDX1P52945 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.18□□□□□ -1.9
PDX1P52945 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
PDX1P52945 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDX1P52945 RNU4-1-201ENST00000363925 141 ntBASIC3.18□□□□□ -1.9
PDX1P52945 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms