Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 HMGB1P37-201ENST00000439613 609 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK3P51956 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 MTCO3P20-201ENST00000454926 688 ntBASIC3.96□□□□□ -1.78
NEK3P51956 C1DP4-201ENST00000455429 424 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RPL21P11-201ENST00000461458 483 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RPS3AP17-201ENST00000472594 777 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC117522.1-201ENST00000509821 380 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC006445.2-201ENST00000510061 472 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.96□□□□□ -1.78
NEK3P51956 SAP18P1-201ENST00000512058 390 ntBASIC3.96□□□□□ -1.78
NEK3P51956 SNORA31.1-201ENST00000515993 133 ntBASIC3.96□□□□□ -1.78
NEK3P51956 SNORA31.5-201ENST00000516190 133 ntBASIC3.96□□□□□ -1.78
NEK3P51956 RNU1-45P-201ENST00000517191 141 ntBASIC3.96□□□□□ -1.78
NEK3P51956 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.96□□□□□ -1.78
NEK3P51956 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.96□□□□□ -1.78
NEK3P51956 HIGD1AP1-201ENST00000550979 275 ntBASIC3.96□□□□□ -1.78
NEK3P51956 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
NEK3P51956 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.96□□□□□ -1.78
NEK3P51956 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.96□□□□□ -1.78
NEK3P51956 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC098614.4-201ENST00000607601 462 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AL589994.2-201ENST00000621124 579 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AC244205.2-202ENST00000635781 342 ntBASIC3.96□□□□□ -1.78
NEK3P51956 AL392088.2-201ENST00000637607 285 ntBASIC3.96□□□□□ -1.78
NEK3P51956 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NEK3P51956 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.95□□□□□ -1.78
NEK3P51956 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.95□□□□□ -1.78
NEK3P51956 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
NEK3P51956 RNU6-1167P-201ENST00000363227 94 ntBASIC3.95□□□□□ -1.78
NEK3P51956 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.95□□□□□ -1.78
NEK3P51956 RNU6-1103P-201ENST00000384150 107 ntBASIC3.95□□□□□ -1.78
NEK3P51956 RNU6-39P-201ENST00000384344 107 ntBASIC3.95□□□□□ -1.78
NEK3P51956 RNU6ATAC-201ENST00000408749 126 ntBASIC3.95□□□□□ -1.78
NEK3P51956 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.95□□□□□ -1.78
NEK3P51956 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 AC104651.1-201ENST00000427559 735 ntBASIC3.95□□□□□ -1.78
NEK3P51956 USP9YP14-201ENST00000430663 563 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 AC007389.2-201ENST00000434630 306 ntBASIC3.95□□□□□ -1.78
NEK3P51956 PRDX3P3-201ENST00000447765 522 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC132479.1-201ENST00000449160 144 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 RN7SL542P-201ENST00000467147 294 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC023194.1-201ENST00000493084 308 ntBASIC3.95□□□□□ -1.78
NEK3P51956 RN7SL323P-201ENST00000494712 295 ntBASIC3.95□□□□□ -1.78
NEK3P51956 RPL7P47-201ENST00000497299 556 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AL358832.1-201ENST00000497800 389 ntBASIC3.95□□□□□ -1.78
NEK3P51956 HMGB1P29-201ENST00000505659 499 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.95□□□□□ -1.78
NEK3P51956 RNU6-677P-201ENST00000516914 101 ntBASIC3.95□□□□□ -1.78
NEK3P51956 RN7SKP60-201ENST00000516985 239 ntBASIC3.95□□□□□ -1.78
NEK3P51956 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 MTND1P15-201ENST00000579262 949 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.95□□□□□ -1.78
NEK3P51956 DPPA3P3-201ENST00000603842 430 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC087241.4-201ENST00000612441 480 ntBASIC3.95□□□□□ -1.78
NEK3P51956 U6.98-201ENST00000637157 84 ntBASIC3.95□□□□□ -1.78
NEK3P51956 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
NEK3P51956 AL359693.1-201ENST00000614959 2407 ntBASIC3.95□□□□□ -1.78
NEK3P51956 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NEK3P51956 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
NEK3P51956 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.94□□□□□ -1.78
NEK3P51956 MTND5P29-201ENST00000458676 1807 ntBASIC3.94□□□□□ -1.78
NEK3P51956 OR5J1P-201ENST00000313544 939 ntBASIC3.94□□□□□ -1.78
NEK3P51956 RNU6-181P-201ENST00000363225 107 ntBASIC3.94□□□□□ -1.78
NEK3P51956 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
NEK3P51956 RNU6-1035P-201ENST00000384477 107 ntBASIC3.94□□□□□ -1.78
NEK3P51956 RNU6-328P-201ENST00000390887 106 ntBASIC3.94□□□□□ -1.78
NEK3P51956 GSTA9P-201ENST00000406231 611 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.94□□□□□ -1.78
NEK3P51956 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.94□□□□□ -1.78
NEK3P51956 AC007919.1-201ENST00000429380 217 ntBASIC3.94□□□□□ -1.78
NEK3P51956 RPS20P5-201ENST00000434808 360 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.94□□□□□ -1.78
NEK3P51956 AC126389.1-201ENST00000477436 290 ntBASIC3.94□□□□□ -1.78
NEK3P51956 KC877373.1-201ENST00000479066 408 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AL135752.1-201ENST00000479477 471 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC082651.2-201ENST00000496833 166 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.94□□□□□ -1.78
NEK3P51956 SCARNA24.1-201ENST00000516465 137 ntBASIC3.94□□□□□ -1.78
NEK3P51956 RNU6-445P-201ENST00000516949 107 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.94□□□□□ -1.78
NEK3P51956 AC087369.1-201ENST00000520775 996 ntBASIC3.94□□□□□ -1.78
NEK3P51956 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.94□□□□□ -1.78
NEK3P51956 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.94□□□□□ -1.78
NEK3P51956 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
NEK3P51956 AC009063.1-201ENST00000563342 702 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms