Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN1P35523 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN1P35523 AC087190.1-201ENST00000484462 480 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AC107032.1-201ENST00000485945 480 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AC026784.1-201ENST00000507986 352 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 RNA5SP360-201ENST00000516555 118 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AC024940.3-201ENST00000538551 316 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AC093023.1-201ENST00000547375 507 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AL161713.1-201ENST00000555538 145 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.09□□□□□ -1.43
CLCN1P35523 SNORD84-203ENST00000584275 78 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN1P35523 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN1P35523 BX284668.6-201ENST00000606899 438 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC6.09□□□□□ -1.43
CLCN1P35523 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.09□□□□□ -1.43
CLCN1P35523 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 SMG1P6-201ENST00000532337 2930 ntBASIC6.09□□□□□ -1.43
CLCN1P35523 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CLCN1P35523 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
CLCN1P35523 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLCN1P35523 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
CLCN1P35523 AC005332.5-201ENST00000591222 2919 ntBASIC6.09□□□□□ -1.44
CLCN1P35523 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.08□□□□□ -1.44
CLCN1P35523 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.08□□□□□ -1.44
CLCN1P35523 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLCN1P35523 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLCN1P35523 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLCN1P35523 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLCN1P35523 snoU2_19.2-201ENST00000363024 80 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 RNU6-1167P-201ENST00000363227 94 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 Y_RNA.277-201ENST00000364754 102 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 RNU6-746P-201ENST00000384112 109 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 RNU6-886P-201ENST00000384319 105 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AC091286.1-201ENST00000431233 461 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.08□□□□□ -1.44
CLCN1P35523 HLA-DPA3-207ENST00000454398 229 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 RN7SL799P-201ENST00000475891 298 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 RN7SL214P-201ENST00000487317 265 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AL049874.1-201ENST00000489560 388 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 SCARNA20.4-201ENST00000516969 131 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AC022868.1-201ENST00000517767 391 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AL590705.4-201ENST00000532209 134 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AC007458.1-201ENST00000542812 373 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AL162431.4-201ENST00000604674 411 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AC006077.1-201ENST00000604746 343 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 AC009318.2-201ENST00000610917 651 ntBASIC6.08□□□□□ -1.44
CLCN1P35523 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.08□□□□□ -1.44
CLCN1P35523 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CLCN1P35523 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.08□□□□□ -1.44
CLCN1P35523 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
CLCN1P35523 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CLCN1P35523 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CLCN1P35523 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.07□□□□□ -1.44
CLCN1P35523 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CLCN1P35523 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 AC112198.2-201ENST00000426589 6996 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 RNU6-384P-201ENST00000364900 104 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 SNORD56.6-201ENST00000384569 71 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 SNORD115-46-201ENST00000390982 71 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 TOMM20P4-201ENST00000427861 435 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 RPL35AP21-201ENST00000437667 333 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.07□□□□□ -1.44
CLCN1P35523 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.07□□□□□ -1.44
CLCN1P35523 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.07□□□□□ -1.44
CLCN1P35523 AL589765.3-201ENST00000446084 462 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AL591623.2-201ENST00000449978 222 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 RN7SL184P-201ENST00000488308 297 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AC010469.2-201ENST00000496412 480 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.07□□□□□ -1.44
CLCN1P35523 AC134698.5-201ENST00000519444 336 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CLCN1P35523 AC021006.3-201ENST00000530771 192 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 AC103996.1-201ENST00000555468 102 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.07□□□□□ -1.44
CLCN1P35523 AC022968.1-201ENST00000567372 442 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 FKBP1AP1-201ENST00000594588 318 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 MIR6839-201ENST00000620425 113 ntBASIC6.07□□□□□ -1.44
CLCN1P35523 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.07□□□□□ -1.44
CLCN1P35523 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.07□□□□□ -1.44
CLCN1P35523 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CLCN1P35523 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.07□□□□□ -1.44
CLCN1P35523 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
CLCN1P35523 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CLCN1P35523 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.06□□□□□ -1.44
CLCN1P35523 MIR412-201ENST00000362142 91 ntBASIC6.06□□□□□ -1.44
CLCN1P35523 SNORD81.1-201ENST00000363064 77 ntBASIC6.06□□□□□ -1.44
CLCN1P35523 Y_RNA.200-201ENST00000364018 102 ntBASIC6.06□□□□□ -1.44
CLCN1P35523 RN7SKP227-201ENST00000364445 330 ntBASIC6.06□□□□□ -1.44
CLCN1P35523 MTND3P9-201ENST00000429526 346 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms