Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC024909.2-201ENST00000553035 286 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA13P31271 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA13P31271 AC012213.3-201ENST00000577199 777 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA13P31271 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA13P31271 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 MIR548AB-201ENST00000584917 84 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA13P31271 AC008507.1-201ENST00000587506 734 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA13P31271 RMST_8.1-201ENST00000610287 165 ntBASIC3.54□□□□□ -1.84
HOXA13P31271 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.54□□□□□ -1.84
HOXA13P31271 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA13P31271 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 RNU5E-8P-201ENST00000363502 116 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 Y_RNA.194-201ENST00000363985 102 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RNU5E-5P-201ENST00000365379 116 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 Y_RNA.553-201ENST00000384670 102 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC110754.1-201ENST00000399740 601 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 UBA52P6-201ENST00000399822 382 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RPS20P2-201ENST00000402520 389 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RNU4-65P-201ENST00000410473 140 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RN7SKP142-201ENST00000411236 328 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 MTND1P21-201ENST00000412991 285 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 MTATP6P4-201ENST00000427725 675 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RPL7L1P10-201ENST00000427790 463 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC090774.1-201ENST00000435925 246 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 AC011825.1-201ENST00000484967 388 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC135721.1-201ENST00000497954 479 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC112204.1-201ENST00000502591 103 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 AC105914.1-201ENST00000511798 226 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 GMPSP1-201ENST00000514075 579 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXA13P31271 RNU1-143P-201ENST00000516296 146 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 ERHP1-201ENST00000523006 310 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 PSMA2P1-201ENST00000526365 646 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 DEFB108D-201ENST00000527787 222 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC022880.1-201ENST00000534017 973 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC022080.3-201ENST00000544433 482 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.53□□□□□ -1.84
HOXA13P31271 AC055876.1-202ENST00000567053 138 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC006362.1-201ENST00000567392 174 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.53□□□□□ -1.84
HOXA13P31271 AGGF1P4-201ENST00000568249 801 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 COX6CP3-201ENST00000580869 223 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC022146.1-201ENST00000595307 847 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.53□□□□□ -1.84
HOXA13P31271 AC073544.2-201ENST00000601155 540 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 AC007038.2-201ENST00000608095 740 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 U1.23-201ENST00000610293 146 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 RNU1-68P-201ENST00000615382 146 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HOXA13P31271 U1.39-201ENST00000621562 146 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXA13P31271 AC010149.2-201ENST00000637608 315 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 MIR622-201ENST00000638396 96 ntBASIC3.53□□□□□ -1.84
HOXA13P31271 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA13P31271 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXA13P31271 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HOXA13P31271 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA13P31271 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA13P31271 AC007256.1-201ENST00000392253 2765 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA13P31271 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HOXA13P31271 MTND4P5-201ENST00000435821 1374 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RPL7P26-201ENST00000333817 754 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXA13P31271 Y_RNA.46-201ENST00000362695 102 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HOXA13P31271 RNU6-76P-201ENST00000384060 104 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RNU6-278P-201ENST00000390945 109 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RNA5SP31-201ENST00000411144 127 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA13P31271 AC007390.1-201ENST00000415722 356 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 YPEL5P1-201ENST00000419731 367 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 CYCSP46-201ENST00000423569 204 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RPL35AP12-201ENST00000425362 338 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA13P31271 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA13P31271 FTH1P1-201ENST00000437933 532 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RPL26P6-201ENST00000440913 438 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXA13P31271 USP9YP12-201ENST00000450481 570 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 SNRPGP9-201ENST00000456025 225 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AC004801.2-202ENST00000463559 283 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 RPS15AP36-201ENST00000492022 382 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA13P31271 AP003033.1-201ENST00000527244 415 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA13P31271 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXA13P31271 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXA13P31271 OR4T1P-201ENST00000554933 911 ntBASIC3.52□□□□□ -1.85
HOXA13P31271 AL391156.1-201ENST00000554965 554 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms